RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 ARHGEF15O94989 841 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 TCTN1Q2MV58 587 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 XKR3Q5GH77 459 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 TRIM50Q86XT4 487 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 TPH2Q8IWU9 490 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 DYDC2Q96IM9 177 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 CCDC43Q96MW1 224 aaKnown RBP22.49■■□□□ 1.19
USP53-208ENST00000514305 GBP4Q96PP9 640 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 SETD4Q9NVD3 440 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 PPME1Q9Y570 386 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 SIP14410 1827 aa22.49■■□□□ 1.19
USP53-208ENST00000514305 POTEB3A0JP26 581 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 LCHNA4D1U4 455 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 RRN3P2A6NIE6 340 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 AMHP03971 560 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 XRCC6P12956 609 aaKnown RBP eCLIP22.48■■□□□ 1.19
USP53-208ENST00000514305 AAK1Q2M2I8 961 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 IER5LQ5T953 404 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 POTEBQ6S5H4 581 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 CABP7Q86V35 215 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 DBF4BQ8NFT6 615 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 ATP8B4Q8TF62 1192 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 NACC1Q96RE7 527 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 HSD17B14Q9BPX1 270 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 PYM1Q9BRP8 204 aaKnown RBP22.48■■□□□ 1.19
USP53-208ENST00000514305 LXNQ9BS40 222 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 CSRNP2Q9H175 543 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 FAM13BQ9NYF5 915 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 IGSF9BQ9UPX0 1349 aa22.48■■□□□ 1.19
USP53-208ENST00000514305 REV3LO60673 3130 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 TNFRSF10AO00220 468 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 SLITRK3O94933 977 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 LYPLA2O95372 231 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 OATP04181 439 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 CTSHP09668 335 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 IL17AQ16552 155 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 ZNF484Q5JVG2 852 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 FAM117BQ6P1L5 589 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 BANK1Q8NDB2 785 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 SEPT8Q92599 483 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 PCYT2Q99447 389 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 CCSER1Q9C0I3 900 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 NRCAMQ92823 1304 aa22.47■■□□□ 1.19
USP53-208ENST00000514305 GOLGA6L22H0YM25 854 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 MARK3P27448 753 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 PRKCEQ02156 737 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 CYP4A11Q02928 519 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 GRB10Q13322 594 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 PLEKHG4Q58EX7 1191 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 ADALQ6DHV7 355 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 ADAMTS19Q8TE59 1207 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 JPH2Q9BR39 696 aaPredicted RBP22.46■■□□□ 1.19
USP53-208ENST00000514305 ANKEF1Q9NU02 776 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 RGL1Q9NZL6 768 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 PCDHA7Q9UN72 937 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 DNM3Q9UQ16 869 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 INSL6Q9Y581 213 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 MYH15Q9Y2K3 1946 aa22.46■■□□□ 1.19
USP53-208ENST00000514305 TTC28Q96AY4 2481 aa22.45■■□□□ 1.18
USP53-208ENST00000514305 DDX11L8A8MPP1 907 aa22.45■■□□□ 1.18
USP53-208ENST00000514305 RPLP2P05387 115 aaKnown RBP22.45■■□□□ 1.18
USP53-208ENST00000514305 CTTNQ14247 550 aaKnown RBP22.45■■□□□ 1.18
USP53-208ENST00000514305 PLCB4Q15147 1175 aa22.45■■□□□ 1.18
USP53-208ENST00000514305 CATSPER3Q86XQ3 398 aa22.45■■□□□ 1.18
USP53-208ENST00000514305 MYOCDQ8IZQ8 938 aa22.45■■□□□ 1.18
USP53-208ENST00000514305 LMBR1Q8WVP7 490 aa22.45■■□□□ 1.18
USP53-208ENST00000514305 TGS1Q96RS0 853 aaKnown RBP22.45■■□□□ 1.18
USP53-208ENST00000514305 TELO2Q9Y4R8 837 aa22.45■■□□□ 1.18
USP53-208ENST00000514305 COL1A2P08123 1366 aa22.45■■□□□ 1.18
USP53-208ENST00000514305 LINC01553A4QN01 128 aa22.44■■□□□ 1.18
USP53-208ENST00000514305 YWHABP31946 246 aaKnown RBP22.44■■□□□ 1.18
USP53-208ENST00000514305 PPFIA1Q13136 1202 aa22.44■■□□□ 1.18
USP53-208ENST00000514305 ZRSR1Q15695 479 aaKnown RBP22.44■■□□□ 1.18
USP53-208ENST00000514305 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.44■■□□□ 1.18
USP53-208ENST00000514305 CCDC73Q6ZRK6 1079 aa22.44■■□□□ 1.18
USP53-208ENST00000514305 SPRED2Q7Z698 418 aa22.44■■□□□ 1.18
USP53-208ENST00000514305 GDPD5Q8WTR4 605 aa22.44■■□□□ 1.18
USP53-208ENST00000514305 CLIC6Q96NY7 704 aa22.44■■□□□ 1.18
USP53-208ENST00000514305 TCF20Q9UGU0 1960 aaKnown RBP22.44■■□□□ 1.18
USP53-208ENST00000514305 SEPT9Q9UHD8 586 aaPredicted RBP22.44■■□□□ 1.18
USP53-208ENST00000514305 MTUS1Q9ULD2 1270 aa22.44■■□□□ 1.18
USP53-208ENST00000514305 COG5Q9UP83 839 aa22.44■■□□□ 1.18
USP53-208ENST00000514305 MAGEB2O15479 319 aa22.43■■□□□ 1.18
USP53-208ENST00000514305 MED24O75448 989 aa22.43■■□□□ 1.18
USP53-208ENST00000514305 HYIQ5T013 277 aa22.43■■□□□ 1.18
USP53-208ENST00000514305 APBB2Q92870 758 aa22.43■■□□□ 1.18
USP53-208ENST00000514305 UHRF1Q96T88 793 aaPredicted RBP22.43■■□□□ 1.18
USP53-208ENST00000514305 NIFKQ9BYG3 293 aaKnown RBP22.43■■□□□ 1.18
USP53-208ENST00000514305 KIAA1024Q9UPX6 916 aa22.43■■□□□ 1.18
USP53-208ENST00000514305 SPATA31C1P0DKV0 1188 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 ERVK-21P61565 698 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 ADAM17P78536 824 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 TFF2Q03403 129 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 RRAGBQ5VZM2 374 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 TAF2Q6P1X5 1199 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 CLEC17AQ6ZS10 378 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 RSPH3Q86UC2 560 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 CCDC34Q96HJ3 373 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 CEP170P1Q96L14 293 aa22.42■■□□□ 1.18
USP53-208ENST00000514305 DDX19AQ9NUU7 478 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms