RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 ZNF577Q9BSK1 485 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 PARVGQ9HBI0 331 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 TUFT1Q9NNX1 390 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 OLFML3Q9NRN5 406 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 PKD2L1Q9P0L9 805 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 ZBTB21Q9ULJ3 1066 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 ZMYM2Q9UBW7 1377 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 ZSCAN5CA6NGD5 496 aaPredicted RBP13.67□□□□□ -0.22
SDHA-216ENST00000514027 AGPSO00116 658 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 MYO1FO00160 1098 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 TGFB1I1O43294 461 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 PPP1R12BO60237 982 aaPredicted RBP13.67□□□□□ -0.22
SDHA-216ENST00000514027 PSMD10O75832 226 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 HEXIM1O94992 359 aaKnown RBP13.67□□□□□ -0.22
SDHA-216ENST00000514027 CYP2J2P51589 502 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 PRELPP51888 382 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 CCNHP51946 323 aaPredicted RBP13.67□□□□□ -0.22
SDHA-216ENST00000514027 ADCY2Q08462 1091 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 AP1ARQ63HQ0 302 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 DPY19L2P1Q6NXN4 242 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 ALKBH5Q6P6C2 394 aaKnown RBP13.67□□□□□ -0.22
SDHA-216ENST00000514027 MIGA2Q7L4E1 593 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 IFT81Q8WYA0 676 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 RUBCNQ92622 972 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 KRT12Q99456 494 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 NAGPAQ9UK23 515 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 TMX2Q9Y320 296 aa13.67□□□□□ -0.22
SDHA-216ENST00000514027 BZW2Q9Y6E2 419 aaKnown RBP13.67□□□□□ -0.22
SDHA-216ENST00000514027 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 KCNK3O14649 394 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 FLOT1O75955 427 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 GFPT2O94808 682 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 GLI1P08151 1106 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 GUCY2DQ02846 1103 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 PLS1Q14651 629 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 DLGAP5Q15398 846 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 ZNF772Q68DY9 489 aaPredicted RBP13.66□□□□□ -0.22
SDHA-216ENST00000514027 C1orf186Q6ZWK4 172 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 CDAN1Q8IWY9 1227 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 FAM178BQ8IXR5 827 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 ZNF483Q8TF39 744 aaPredicted RBP13.66□□□□□ -0.22
SDHA-216ENST00000514027 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 SIX2Q9NPC8 291 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 RNF14Q9UBS8 474 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 ZNF70Q9UC06 446 aaPredicted RBP13.66□□□□□ -0.22
SDHA-216ENST00000514027 SHTN1A0MZ66 631 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 GOLGA6CA6NDK9 693 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 EIF3DO15371 548 aaKnown RBP eCLIP13.66□□□□□ -0.22
SDHA-216ENST00000514027 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
SDHA-216ENST00000514027 GOLGA6DP0CG33 693 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 ARP10275 920 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 PSMC2P35998 433 aaKnown RBP13.66□□□□□ -0.22
SDHA-216ENST00000514027 TRAF1Q13077 416 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 PPP2R5CQ13362 524 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 RPS6KA1Q15418 735 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 CEP55Q53EZ4 464 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 ODR4Q5SWX8 454 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 MAEAQ7L5Y9 396 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 VPS36Q86VN1 386 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 KLHL7Q8IXQ5 586 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 TSEN2Q8NCE0 465 aaKnown RBP13.66□□□□□ -0.22
SDHA-216ENST00000514027 SUPT20HQ8NEM7 779 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 UNC45AQ9H3U1 944 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 EPB41L5Q9HCM4 733 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 FBXO28Q9NVF7 368 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 GOLGA6AQ9NYA3 693 aa13.66□□□□□ -0.22
SDHA-216ENST00000514027 WRAP73Q9P2S5 460 aaPredicted RBP13.66□□□□□ -0.22
SDHA-216ENST00000514027 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
SDHA-216ENST00000514027 FSBPO95073 299 aa13.65□□□□□ -0.22
SDHA-216ENST00000514027 C10orf76Q5T2E6 689 aa13.65□□□□□ -0.22
SDHA-216ENST00000514027 IFT20Q8IY31 132 aa13.65□□□□□ -0.22
SDHA-216ENST00000514027 U2AF1L4Q8WU68 220 aaKnown RBP13.65□□□□□ -0.22
SDHA-216ENST00000514027 CHURC1Q8WUH1 139 aa13.65□□□□□ -0.22
SDHA-216ENST00000514027 SLC5A5Q92911 643 aa13.65□□□□□ -0.22
SDHA-216ENST00000514027 RANBP17Q9H2T7 1088 aaKnown RBP13.65□□□□□ -0.22
SDHA-216ENST00000514027 PRDM16Q9HAZ2 1276 aa13.65□□□□□ -0.22
SDHA-216ENST00000514027 NFU1Q9UMS0 254 aa13.65□□□□□ -0.22
SDHA-216ENST00000514027 MRPL11Q9Y3B7 192 aaKnown RBP13.65□□□□□ -0.22
SDHA-216ENST00000514027 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
SDHA-216ENST00000514027 COL2A1P02458 1487 aaPredicted RBP13.65□□□□□ -0.22
SDHA-216ENST00000514027 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 CARSP49589 748 aaKnown RBP13.64□□□□□ -0.23
SDHA-216ENST00000514027 IFI16Q16666 785 aaKnown RBP13.64□□□□□ -0.23
SDHA-216ENST00000514027 GLE1Q53GS7 698 aaKnown RBP13.64□□□□□ -0.23
SDHA-216ENST00000514027 ZC3H12AQ5D1E8 599 aaKnown RBP13.64□□□□□ -0.23
SDHA-216ENST00000514027 EMBQ6PCB8 327 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 HS2ST1Q7LGA3 356 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 FAM76AQ8TAV0 307 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 ZNF526Q8TF50 670 aaPredicted RBP13.64□□□□□ -0.23
SDHA-216ENST00000514027 C7orf43Q8WVR3 580 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 FAM210AQ96ND0 272 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 INPP4AQ96PE3 977 aaPredicted RBP13.64□□□□□ -0.23
SDHA-216ENST00000514027 LXNQ9BS40 222 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 TEKT3Q9BXF9 490 aa13.64□□□□□ -0.23
SDHA-216ENST00000514027 GLIS2Q9BZE0 524 aaPredicted RBP13.64□□□□□ -0.23
SDHA-216ENST00000514027 TMEM39BQ9GZU3 492 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms