RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 AUTS2Q8WXX7 1259 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 EDEM2Q9BV94 578 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 SMOC1Q9H4F8 434 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 DBNLQ9UJU6 430 aaKnown RBP8.93□□□□□ -0.98
CLDND1-229ENST00000513988 PADI3Q9ULW8 664 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 MYH15Q9Y2K3 1946 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 COL12A1Q99715 3063 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 KAT6AQ92794 2004 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 CCDC171Q6TFL3 1326 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 EPN2O95208 641 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 GGPS1O95749 300 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 ADAM17P78536 824 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 MRPS6P82932 125 aaKnown RBP8.92□□□□□ -0.98
CLDND1-229ENST00000513988 SCAPQ12770 1279 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 OS9Q13438 667 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-229ENST00000513988 GIT2Q14161 759 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 TTF1Q15361 905 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-229ENST00000513988 PROX2Q3B8N5 592 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 ZNF444Q8N0Y2 327 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-229ENST00000513988 LOXL4Q96JB6 756 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 IWS1Q96ST2 819 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 MEIS3Q99687 375 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 IER2Q9BTL4 223 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 CHRDQ9H2X0 955 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 CCDC86Q9H6F5 360 aaKnown RBP8.92□□□□□ -0.98
CLDND1-229ENST00000513988 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 TLR7Q9NYK1 1049 aaKnown RBP8.92□□□□□ -0.98
CLDND1-229ENST00000513988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLDND1-229ENST00000513988 ARPP21Q9UBL0 812 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-229ENST00000513988 PNMA2Q9UL42 364 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 SQORQ9Y6N5 450 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 UBR5O95071 2799 aaPredicted RBP8.92□□□□□ -0.98
CLDND1-229ENST00000513988 NOTCH2Q04721 2471 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 SPAG17Q6Q759 2223 aa8.92□□□□□ -0.98
CLDND1-229ENST00000513988 LAMA4Q16363 1823 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 TCRBV5S4A2TA0A5A2 114 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 BHMG1C9JSJ3 638 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-229ENST00000513988 ATXN7O15265 892 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-229ENST00000513988 EIF3JO75822 258 aaKnown RBP8.91□□□□□ -0.98
CLDND1-229ENST00000513988 FGFR1P11362 822 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 FGD1P98174 961 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 ZNF852Q6ZMS4 543 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 GET4Q7L5D6 327 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-229ENST00000513988 LONP2Q86WA8 852 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 VPS52Q8N1B4 723 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 SLC39A11Q8N1S5 342 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 CMASQ8NFW8 434 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-229ENST00000513988 DNAJB3Q8WWF6 145 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 RPP25Q9BUL9 199 aaKnown RBP8.91□□□□□ -0.98
CLDND1-229ENST00000513988 ZBP1Q9H171 429 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 MLXIPQ9HAP2 919 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 ATP6V0A4Q9HBG4 840 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 VPS45Q9NRW7 570 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 ZNF215Q9UL58 517 aaPredicted RBP8.91□□□□□ -0.98
CLDND1-229ENST00000513988 RAXQ9Y2V3 346 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 IRAK3Q9Y616 596 aa8.91□□□□□ -0.98
CLDND1-229ENST00000513988 ITPR3Q14573 2671 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 ZBED9Q6R2W3 1325 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 CCDC195A0A1B0GUA6 201 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 DENND3A2RUS2 1198 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 M0QZ92 97 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 NOP56O00567 594 aaKnown RBP8.9□□□□□ -0.98
CLDND1-229ENST00000513988 RDXP35241 583 aaKnown RBP8.9□□□□□ -0.98
CLDND1-229ENST00000513988 SLC16A2P36021 539 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 MPLP40238 635 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 CXCL12P48061 93 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 FZD5Q13467 585 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 WTAPQ15007 396 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 CCDC96Q2M329 555 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 PLA2G2CQ5R387 149 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 SYDE2Q5VT97 1194 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 IER5Q5VY09 327 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 HEATR6Q6AI08 1181 aaKnown RBP8.9□□□□□ -0.98
CLDND1-229ENST00000513988 TCEAL6Q6IPX3 200 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 KCNV1Q6PIU1 500 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 CYP26C1Q6V0L0 522 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 LRRC43Q8N309 656 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 DDX12PQ92771 950 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 TCEAL3Q969E4 200 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 TMEM169Q96HH4 297 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 TAAR1Q96RJ0 339 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 RMDN3Q96TC7 470 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 SLC4A5Q9BY07 1137 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 TMEM117Q9H0C3 514 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 TMX1Q9H3N1 280 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 C1orf112Q9NSG2 853 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 PLA2G2EQ9NZK7 142 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 MTMR7Q9Y216 660 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 SLC4A4Q9Y6R1 1079 aa8.9□□□□□ -0.98
CLDND1-229ENST00000513988 URB1O60287 2271 aaKnown RBP8.9□□□□□ -0.98
CLDND1-229ENST00000513988 PRDM1O75626 825 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 CTSAP10619 480 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 KLRC2P26717 231 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 CLCN4P51793 760 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 SATB1Q01826 763 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 NFX1Q12986 1120 aaKnown RBP8.89□□□□□ -0.99
CLDND1-229ENST00000513988 ARHGEF16Q5VV41 709 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 ELMSAN1Q6PJG2 1045 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 LRRC55Q6ZSA7 311 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 SLC24A5Q71RS6 500 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms