RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 C9IYK1 514 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 DDX3XO00571 662 aaKnown RBP eCLIP4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF28P17035 718 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 EIF4A3P38919 411 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 TM4SF4P48230 202 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 ITGA1P56199 1179 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 CLCQ05315 142 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 SPDYAQ5MJ70 313 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 NOL9Q5SY16 702 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 SLFN13Q68D06 897 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF585AQ6P3V2 769 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 OLFM4Q6UX06 510 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 FIBCD1Q8N539 461 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF296Q8WUU4 475 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF496Q96IT1 587 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 BCL2L13Q9BXK5 485 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 RTFDC1Q9BY42 306 aaPredicted RBP4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 NYXQ9GZU5 481 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF408Q9H9D4 720 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 NGRNQ9NPE2 291 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 CNOT7Q9UIV1 285 aaKnown RBP4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 UBR2Q8IWV8 1755 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 NPC1L1Q9UHC9 1359 aa4.9□□□□□ -1.63
PDLIM5-218ENST00000513341 SCN7AQ01118 1682 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 POLR2AP24928 1970 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 PPIP5K2O43314 1243 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 PPP1R11O60927 126 aaPredicted RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF623O75123 536 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 BBOX1O75936 387 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 A1BGP04217 495 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 IFNGR1P15260 489 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 CD247P20963 164 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 CRKP46108 304 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF165P49910 485 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 GMPSP49915 693 aaPredicted RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 MFAP1P55081 439 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 DPTQ07507 201 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 HNRNPA0Q13151 305 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 FOXE3Q13461 319 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 ZC3H18Q86VM9 953 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 PALM2Q8IXS6 379 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 IGDCC4Q8TDY8 1250 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 RPGRQ92834 1020 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 DCPSQ96C86 337 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 CHFRQ96EP1 664 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 RBM17Q96I25 401 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 KBTBD4Q9NVX7 518 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 NIP7Q9Y221 180 aaKnown RBP eCLIP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 DIS3Q9Y2L1 958 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 RWDD3Q9Y3V2 267 aa4.89□□□□□ -1.63
PDLIM5-218ENST00000513341 RPS12P25398 132 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 IL13P35225 146 aa4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 TNNT2P45379 298 aaPredicted RBP4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 TEFQ10587 303 aa4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 KRT26Q7Z3Y9 468 aa4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 DCP2Q8IU60 420 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 YTHDC1Q96MU7 727 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 ATP6V0A2Q9Y487 856 aa4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 COL4A5P29400 1685 aa4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 RBBP6Q7Z6E9 1792 aaKnown RBP4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 RIC1Q4ADV7 1423 aa4.88□□□□□ -1.63
PDLIM5-218ENST00000513341 TRBV23OR9-2A0A075B6M9 112 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 ERVV-1B6SEH8 477 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 AURKAO14965 403 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 CD3EP07766 207 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 SNRPA1P09661 255 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 ABHD18Q0P651 414 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 MTHFSDQ2M296 383 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 SLC10A5Q5PT55 438 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 GK5Q6ZS86 529 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 ARHGEF18Q6ZSZ5 1173 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 SLITRK4Q8IW52 837 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 IL17REQ8NFR9 667 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 Q8TCH9 128 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 BRF1Q92994 677 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 CEP89Q96ST8 783 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 BCL11AQ9H165 835 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 USP16Q9Y5T5 823 aa4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 KIAA0100Q14667 2235 aaKnown RBP4.87□□□□□ -1.63
PDLIM5-218ENST00000513341 CEP290O15078 2479 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 SZT2Q5T011 3432 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 A0A1W2PPC1 479 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 NPIPB8E9PQR5 432 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 ITGA4P13612 1032 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 SREBF2Q12772 1141 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 AXDND1Q5T1B0 1012 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 DCAF15Q66K64 600 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 DPP8Q6V1X1 898 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 DNAJC14Q6Y2X3 702 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 PPFIBP1Q86W92 1011 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 RASAL3Q86YV0 1011 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 ARMC5Q96C12 935 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF503Q96F45 646 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 ZNF341Q9BYN7 854 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 TNFRSF18Q9Y5U5 241 aa4.86□□□□□ -1.63
PDLIM5-218ENST00000513341 TRIOBPQ9H2D6 2365 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 PRAMEF22A3QJZ6 481 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 ANKRD33BA6NCL7 494 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 UNCXA6NJT0 531 aa4.85□□□□□ -1.63
PDLIM5-218ENST00000513341 SORBS3O60504 671 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms