RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 LIPIQ6XZB0 460 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 ATG14Q6ZNE5 492 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 TMEM151BQ8IW70 566 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 STPG3Q8N7X2 389 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 DTX3Q8N9I9 347 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 RSAD2Q8WXG1 361 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 PWWP2AQ96N64 755 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 GORASP1Q9BQQ3 440 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 NOL10Q9BSC4 688 aaKnown RBP5.5□□□□□ -1.53
HTT-210ENST00000512909 ASPSCR1Q9BZE9 553 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 QRSL1Q9H0R6 528 aaKnown RBP5.5□□□□□ -1.53
HTT-210ENST00000512909 OR10A5Q9H207 317 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 LUC7LQ9NQ29 371 aaKnown RBP5.5□□□□□ -1.53
HTT-210ENST00000512909 KLHL42Q9P2K6 505 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 RBPJLQ9UBG7 517 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 FHOD3Q2V2M9 1422 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 UGGT2Q9NYU1 1516 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 KLHL33A6NCF5 533 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 RASSF10A6NK89 507 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 DAPK3O43293 454 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 PCDH8O95206 1070 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 ENPP1P22413 925 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 GLDCP23378 1020 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 IARSP41252 1262 aaKnown RBP5.49□□□□□ -1.53
HTT-210ENST00000512909 RGS3P49796 1198 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 MEOX1P50221 254 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 SLC5A3P53794 718 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 PPP2R5AQ15172 486 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 DGKDQ16760 1214 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 PHF19Q5T6S3 580 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 GRAMD4Q6IC98 578 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 CXXC5Q7LFL8 322 aaKnown RBP5.49□□□□□ -1.53
HTT-210ENST00000512909 IGDCC3Q8IVU1 814 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 RTKN2Q8IZC4 609 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.49□□□□□ -1.53
HTT-210ENST00000512909 FUBP3Q96I24 572 aaKnown RBP eCLIP5.49□□□□□ -1.53
HTT-210ENST00000512909 VTA1Q9NP79 307 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 KCMF1Q9P0J7 381 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 NTMQ9P121 344 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 BTBD7Q9P203 1132 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 SAE1Q9UBE0 346 aaPredicted RBP5.49□□□□□ -1.53
HTT-210ENST00000512909 SAP30BPQ9UHR5 308 aaKnown RBP5.49□□□□□ -1.53
HTT-210ENST00000512909 EDARQ9UNE0 448 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 KCTD3Q9Y597 815 aa5.49□□□□□ -1.53
HTT-210ENST00000512909 CD109Q6YHK3 1445 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 UHRF1BP1LA0JNW5 1464 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 MARCH6O60337 910 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 IL33O95760 270 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 CHGBP05060 677 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 VCAM1P19320 739 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 PI3P19957 117 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 ADCY8P40145 1251 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 RAP1GAPP47736 663 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 PPARAQ07869 468 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 NOLC1Q14978 699 aaKnown RBP eCLIP5.48□□□□□ -1.53
HTT-210ENST00000512909 FSCN1Q16658 493 aaKnown RBP5.48□□□□□ -1.53
HTT-210ENST00000512909 MAN2A1Q16706 1144 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 TOR2AQ5JU69 321 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 LRSAM1Q6UWE0 723 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 LMBR1LQ6UX01 489 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 RTN4RL1Q86UN2 441 aaPredicted RBP5.48□□□□□ -1.53
HTT-210ENST00000512909 FAM124AQ86V42 546 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 WDR75Q8IWA0 830 aaKnown RBP5.48□□□□□ -1.53
HTT-210ENST00000512909 CDYL2Q8N8U2 506 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 STAG1Q8WVM7 1258 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 AUTS2Q8WXX7 1259 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 EAF2Q96CJ1 260 aaPredicted RBP5.48□□□□□ -1.53
HTT-210ENST00000512909 ZNF496Q96IT1 587 aaPredicted RBP5.48□□□□□ -1.53
HTT-210ENST00000512909 FAXDC2Q96IV6 333 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 PCGF6Q9BYE7 350 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 MS4A5Q9H3V2 200 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 MTG2Q9H4K7 406 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 LUC7L2Q9Y383 392 aaKnown RBP5.48□□□□□ -1.53
HTT-210ENST00000512909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
HTT-210ENST00000512909 KIAA0556O60303 1618 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 MYPNQ86TC9 1320 aa5.48□□□□□ -1.53
HTT-210ENST00000512909 ATP10BO94823 1461 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 LCHNA4D1U4 455 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 GABRDO14764 452 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 LPLP06858 475 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 U2AF1L5P0DN76 240 aaPredicted RBP5.47□□□□□ -1.53
HTT-210ENST00000512909 FBLN1P23142 703 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 RECQLP46063 649 aaPredicted RBP5.47□□□□□ -1.53
HTT-210ENST00000512909 SLC16A1P53985 500 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 MANFP55145 182 aaKnown RBP5.47□□□□□ -1.53
HTT-210ENST00000512909 U2AF1Q01081 240 aaKnown RBP eCLIP5.47□□□□□ -1.53
HTT-210ENST00000512909 C1orf162Q8NEQ5 155 aaPredicted RBP5.47□□□□□ -1.53
HTT-210ENST00000512909 OR14C36Q8NHC7 312 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 LMBR1Q8WVP7 490 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 FOXRED1Q96CU9 486 aaPredicted RBP5.47□□□□□ -1.53
HTT-210ENST00000512909 HOOK2Q96ED9 719 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 PAWRQ96IZ0 340 aaKnown RBP5.47□□□□□ -1.53
HTT-210ENST00000512909 TMEM168Q9H0V1 697 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 BARX1Q9HBU1 254 aaPredicted RBP5.47□□□□□ -1.53
HTT-210ENST00000512909 IP6K2Q9UHH9 426 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 ZNF180Q9UJW8 692 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 FAM184BQ9ULE4 1060 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 PCDHB6Q9Y5E3 794 aa5.47□□□□□ -1.53
HTT-210ENST00000512909 EID1Q9Y6B2 187 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms