RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 PPP2CAP67775 309 aa7.4□□□□□ -1.22
CHD1-209ENST00000512844 RNF219Q5W0B1 726 aaPredicted RBP7.4□□□□□ -1.22
CHD1-209ENST00000512844 KLHDC10Q6PID8 442 aa7.4□□□□□ -1.22
CHD1-209ENST00000512844 GLB1LQ6UWU2 654 aa7.4□□□□□ -1.22
CHD1-209ENST00000512844 BMP8AQ7Z5Y6 402 aa7.4□□□□□ -1.22
CHD1-209ENST00000512844 SPATS2Q86XZ4 545 aaKnown RBP7.4□□□□□ -1.22
CHD1-209ENST00000512844 NOL10Q9BSC4 688 aaKnown RBP7.4□□□□□ -1.22
CHD1-209ENST00000512844 MTG2Q9H4K7 406 aa7.4□□□□□ -1.22
CHD1-209ENST00000512844 POLR3BQ9NW08 1133 aaPredicted RBP7.4□□□□□ -1.22
CHD1-209ENST00000512844 DENND2AQ9ULE3 1009 aa7.4□□□□□ -1.22
CHD1-209ENST00000512844 NR2E1Q9Y466 385 aa7.4□□□□□ -1.22
CHD1-209ENST00000512844 NPEPPSL1A6NEC2 478 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 DAPK3O43293 454 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 PCDH8O95206 1070 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 MRE11P49959 708 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 RAC3P60763 192 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 PCOLCEQ15113 449 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 ZNF662Q6ZS27 426 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 GCDHQ92947 438 aaPredicted RBP7.39□□□□□ -1.23
CHD1-209ENST00000512844 LPPQ93052 612 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 KIAA1683Q9H0B3 1180 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 WNT8AQ9H1J5 351 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 OR10A2Q9H208 303 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 SLC4A7Q9Y6M7 1214 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 DUSP10Q9Y6W6 482 aa7.39□□□□□ -1.23
CHD1-209ENST00000512844 A0A0G2JLL6 359 aaPredicted RBP7.38□□□□□ -1.23
CHD1-209ENST00000512844 NRP2O60462 931 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 PLATP00750 562 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 NCLP19338 710 aaKnown RBP7.38□□□□□ -1.23
CHD1-209ENST00000512844 MAN2A1Q16706 1144 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 AGBL4Q5VU57 503 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 USP30Q70CQ3 517 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 KANSL1Q7Z3B3 1105 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 CXorf67Q86X51 503 aaPredicted RBP7.38□□□□□ -1.23
CHD1-209ENST00000512844 FAM177A1Q8N128 213 aaPredicted RBP7.38□□□□□ -1.23
CHD1-209ENST00000512844 RELTQ969Z4 430 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 ZNF496Q96IT1 587 aaPredicted RBP7.38□□□□□ -1.23
CHD1-209ENST00000512844 WDR92Q96MX6 357 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 LMF1Q96S06 567 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 BDH2Q9BUT1 245 aa7.38□□□□□ -1.23
CHD1-209ENST00000512844 C12orf65Q9H3J6 166 aaKnown RBP7.38□□□□□ -1.23
CHD1-209ENST00000512844 MYPNQ86TC9 1320 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 ARHGAP6O43182 974 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 GPR39O43194 453 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 OPHN1O60890 802 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 NRG3P56975 720 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 PLP2Q04941 152 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 SLFN13Q68D06 897 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 TRIM68Q6AZZ1 485 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 CDYL2Q8N8U2 506 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 CLRN3Q8NCR9 226 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 ACAP3Q96P50 834 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 LRRC37BQ96QE4 947 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 ANO3Q9BYT9 981 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 SEC61A2Q9H9S3 476 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 PUF60Q9UHX1 559 aaKnown RBP7.37□□□□□ -1.23
CHD1-209ENST00000512844 USP18Q9UMW8 372 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 ATP8A1Q9Y2Q0 1164 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 PTPN22Q9Y2R2 807 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 PCDHB6Q9Y5E3 794 aa7.37□□□□□ -1.23
CHD1-209ENST00000512844 WASHC2AQ641Q2 1341 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 GOLGA8BA8MQT2 603 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 SYN1P17600 705 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 CCDC62Q6P9F0 684 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 LILRA6Q6PI73 481 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 LARP4Q71RC2 724 aaKnown RBP eCLIP7.36□□□□□ -1.23
CHD1-209ENST00000512844 GIMAP8Q8ND71 665 aaPredicted RBP7.36□□□□□ -1.23
CHD1-209ENST00000512844 RSAD2Q8WXG1 361 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 AHCYL2Q96HN2 611 aaKnown RBP7.36□□□□□ -1.23
CHD1-209ENST00000512844 KRTAP4-9Q9BYQ8 210 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 PITHD1Q9GZP4 211 aaPredicted RBP7.36□□□□□ -1.23
CHD1-209ENST00000512844 MS4A5Q9H3V2 200 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 DNAI1Q9UI46 699 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 COL4A3BPQ9Y5P4 624 aa7.36□□□□□ -1.23
CHD1-209ENST00000512844 A0A0A6YYJ9 748 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 PRICKLE3O43900 615 aaPredicted RBP7.35□□□□□ -1.23
CHD1-209ENST00000512844 FSBPO95073 299 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 EYA4O95677 639 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 EPHB4P54760 987 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 ADAM15Q13444 863 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 ZNF827Q17R98 1081 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 TBC1D10BQ4KMP7 808 aaPredicted RBP7.35□□□□□ -1.23
CHD1-209ENST00000512844 KRT40Q6A162 431 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 UNQ6494/PRO21346Q6UXR6 183 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 CIR1Q86X95 450 aaPredicted RBP7.35□□□□□ -1.23
CHD1-209ENST00000512844 DDX42Q86XP3 938 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD1-209ENST00000512844 OR14K1Q8NGZ2 314 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 CXorf38Q8TB03 319 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 SEMA4AQ9H3S1 761 aa7.35□□□□□ -1.23
CHD1-209ENST00000512844 PRSS38A1L453 326 aa7.34□□□□□ -1.23
CHD1-209ENST00000512844 LCHNA4D1U4 455 aa7.34□□□□□ -1.23
CHD1-209ENST00000512844 K7ESM1 405 aa7.34□□□□□ -1.23
CHD1-209ENST00000512844 ELL2O00472 640 aaPredicted RBP7.34□□□□□ -1.23
CHD1-209ENST00000512844 CNOT4O95628 575 aaKnown RBP7.34□□□□□ -1.23
CHD1-209ENST00000512844 CELA3BP08861 270 aa7.34□□□□□ -1.23
CHD1-209ENST00000512844 CLEC2LP0C7M8 214 aa7.34□□□□□ -1.23
CHD1-209ENST00000512844 GPR15P49685 360 aa7.34□□□□□ -1.23
CHD1-209ENST00000512844 MANFP55145 182 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms