RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 DDX53Q86TM3 631 aaKnown RBP3.49□□□□□ -1.85
PDGFC-208ENST00000512711 D2HGDHQ8N465 521 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 KIAA1958Q8N8K9 716 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 CHST14Q8NCH0 376 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 NKD2Q969F2 451 aaPredicted RBP3.49□□□□□ -1.85
PDGFC-208ENST00000512711 FAM89AQ96GI7 184 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 MAML3Q96JK9 1138 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 FOXB1Q99853 325 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 MTFR1LQ9H019 292 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 SLITRK6Q9H5Y7 841 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 PIF1Q9H611 641 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 ZSWIM4Q9H7M6 989 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 CEP72Q9P209 647 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 DENND2AQ9ULE3 1009 aa3.49□□□□□ -1.85
PDGFC-208ENST00000512711 RBM8AQ9Y5S9 174 aaKnown RBP3.49□□□□□ -1.85
PDGFC-208ENST00000512711 CBX4O00257 560 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 ASLP04424 464 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 HNRNPLP14866 589 aaKnown RBP eCLIP3.48□□□□□ -1.853e-16■■■■■ 28.1
PDGFC-208ENST00000512711 ACRV1P26436 265 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 SCNN1GP51170 649 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 PTTG1IPP53801 180 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 PTH1RQ03431 593 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 RRP1BQ14684 758 aaKnown RBP3.48□□□□□ -1.85
PDGFC-208ENST00000512711 SF3A1Q15459 793 aaKnown RBP3.48□□□□□ -1.85
PDGFC-208ENST00000512711 SLFN12LQ6IEE8 588 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 KLHDC10Q6PID8 442 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 Q6ZRM9 215 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 GAREM2Q75VX8 874 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 NXPE1Q8N323 547 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 ANKRD53Q8N9V6 530 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 CACTINQ8WUQ7 758 aaKnown RBP3.48□□□□□ -1.85
PDGFC-208ENST00000512711 RTF1Q92541 710 aaKnown RBP3.48□□□□□ -1.85
PDGFC-208ENST00000512711 RABGGTAQ92696 567 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 TUBGCP5Q96RT8 1024 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 NELFAQ9H3P2 528 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 ACSS2Q9NR19 701 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 SLC2A4RGQ9NR83 387 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 SAE1Q9UBE0 346 aaPredicted RBP3.48□□□□□ -1.85
PDGFC-208ENST00000512711 B4GALT6Q9UBX8 382 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 DNAI1Q9UI46 699 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 VWA7Q9Y334 891 aa3.48□□□□□ -1.85
PDGFC-208ENST00000512711 A0A0A6YYK5 440 aaPredicted RBP3.47□□□□□ -1.85
PDGFC-208ENST00000512711 A0A1W2PRX2 142 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 UBE2QL1A1L167 161 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 LCHNA4D1U4 455 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 PMS2P1A4D2B8 440 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 MAFO75444 373 aaPredicted RBP3.47□□□□□ -1.85
PDGFC-208ENST00000512711 ZNF202O95125 648 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 APPP05067 770 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 CYP17A1P05093 508 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 ATP2A2P16615 1042 aaKnown RBP3.47□□□□□ -1.85
PDGFC-208ENST00000512711 FNTBP49356 437 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 BPIFB4P59827 614 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 SLC25A3Q00325 362 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 ROM1Q03395 351 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 PABPC4Q13310 644 aaKnown RBP eCLIP3.47□□□□□ -1.85
PDGFC-208ENST00000512711 TCIRG1Q13488 830 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 FHL2Q14192 279 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 CFAP100Q494V2 611 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 CRB2Q5IJ48 1285 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 TTC38Q5R3I4 469 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 CLEC14AQ86T13 490 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 OR5AN1Q8NGI8 311 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 SREK1Q8WXA9 508 aaKnown RBP3.47□□□□□ -1.85
PDGFC-208ENST00000512711 RNPC3Q96LT9 517 aaKnown RBP3.47□□□□□ -1.85
PDGFC-208ENST00000512711 SOX7Q9BT81 388 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 SLC6A15Q9H2J7 730 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 OXSMQ9NWU1 459 aa3.47□□□□□ -1.85
PDGFC-208ENST00000512711 UBA6A0AVT1 1052 aaPredicted RBP3.46□□□□□ -1.86
PDGFC-208ENST00000512711 GOLGA8BA8MQT2 603 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 ZNF891A8MT65 544 aaPredicted RBP3.46□□□□□ -1.86
PDGFC-208ENST00000512711 CAPN14A8MX76 684 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 B4E1Z4 1266 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 ELL2O00472 640 aaPredicted RBP3.46□□□□□ -1.86
PDGFC-208ENST00000512711 H2AFYO75367 372 aaKnown RBP3.46□□□□□ -1.86
PDGFC-208ENST00000512711 APOL3O95236 402 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 MAP3K12Q12852 859 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 PCBP1Q15365 356 aaKnown RBP eCLIP3.46□□□□□ -1.86
PDGFC-208ENST00000512711 NFE2L2Q16236 605 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 DGKDQ16760 1214 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 TKFCQ3LXA3 575 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 PRAMEF9Q5VWM5 478 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 FAM111BQ6SJ93 734 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 USP51Q70EK9 711 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 ZNF627Q7L945 461 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 KANSL1Q7Z3B3 1105 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 TMPRSS6Q8IU80 811 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 PLA2G15Q8NCC3 412 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 LARP4BQ92615 738 aaKnown RBP3.46□□□□□ -1.86
PDGFC-208ENST00000512711 GCDHQ92947 438 aaPredicted RBP3.46□□□□□ -1.86
PDGFC-208ENST00000512711 MRFAP1L1Q96HT8 127 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 DYDC2Q96IM9 177 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 ZNF496Q96IT1 587 aaPredicted RBP3.46□□□□□ -1.86
PDGFC-208ENST00000512711 MYL10Q9BUA6 226 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 IKZF4Q9H2S9 585 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 MS4A5Q9H3V2 200 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 POFUT1Q9H488 388 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 PCIF1Q9H4Z3 704 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 ZNF703Q9H7S9 590 aaPredicted RBP3.46□□□□□ -1.86
PDGFC-208ENST00000512711 MMRN2Q9H8L6 949 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms