RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 TMEM143Q96AN5 459 aa17.75■□□□□ 0.43
DDX41-214ENST00000512334 NLRP4Q96MN2 994 aa17.75■□□□□ 0.43
DDX41-214ENST00000512334 MTRQ99707 1265 aa17.75■□□□□ 0.43
DDX41-214ENST00000512334 POLR3CQ9BUI4 534 aaPredicted RBP17.75■□□□□ 0.43
DDX41-214ENST00000512334 GCOM2Q9BZD3 368 aaPredicted RBP17.75■□□□□ 0.43
DDX41-214ENST00000512334 TMX1Q9H3N1 280 aa17.75■□□□□ 0.43
DDX41-214ENST00000512334 PRDM12Q9H4Q4 367 aa17.75■□□□□ 0.43
DDX41-214ENST00000512334 DHX33Q9H6R0 707 aaKnown RBP17.75■□□□□ 0.43
DDX41-214ENST00000512334 CERS4Q9HA82 394 aa17.75■□□□□ 0.43
DDX41-214ENST00000512334 INSL6Q9Y581 213 aa17.75■□□□□ 0.43
DDX41-214ENST00000512334 A0A087WZ62 844 aa17.74■□□□□ 0.43
DDX41-214ENST00000512334 ARHGEF15O94989 841 aa17.74■□□□□ 0.43
DDX41-214ENST00000512334 SYT1P21579 422 aa17.74■□□□□ 0.43
DDX41-214ENST00000512334 RPA1P27694 616 aa17.74■□□□□ 0.43
DDX41-214ENST00000512334 PRPHP41219 470 aa17.74■□□□□ 0.43
DDX41-214ENST00000512334 RARRES1P49788 294 aa17.74■□□□□ 0.43
DDX41-214ENST00000512334 TAP1Q03518 808 aa17.74■□□□□ 0.43
DDX41-214ENST00000512334 POTEGQ6S5H5 508 aa17.74■□□□□ 0.43
DDX41-214ENST00000512334 PSPC1Q8WXF1 523 aaKnown RBP17.74■□□□□ 0.43
DDX41-214ENST00000512334 GAS2L1Q99501 681 aaPredicted RBP17.74■□□□□ 0.43
DDX41-214ENST00000512334 FDXACB1Q9BRP7 624 aaPredicted RBP17.74■□□□□ 0.43
DDX41-214ENST00000512334 TSPYL2Q9H2G4 693 aaPredicted RBP17.74■□□□□ 0.43
DDX41-214ENST00000512334 STXBP5LQ9Y2K9 1186 aa17.74■□□□□ 0.43
DDX41-214ENST00000512334 GAS2O43903 313 aaKnown RBP17.73■□□□□ 0.43
DDX41-214ENST00000512334 CSDE1O75534 798 aaKnown RBP17.73■□□□□ 0.43
DDX41-214ENST00000512334 DARSP14868 501 aaKnown RBP17.73■□□□□ 0.43
DDX41-214ENST00000512334 FOSL2P15408 326 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 FGFR4P22455 802 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 ATP2C1P98194 919 aaPredicted RBP17.73■□□□□ 0.43
DDX41-214ENST00000512334 PDIA5Q14554 519 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 RTN4RL1Q86UN2 441 aaPredicted RBP17.73■□□□□ 0.43
DDX41-214ENST00000512334 KSR1Q8IVT5 923 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 SNX29Q8TEQ0 813 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 TCP11Q8WWU5 503 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 ARNTL2Q8WYA1 636 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 NACC1Q96RE7 527 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 ADAM2Q99965 735 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 ATP6V0A4Q9HBG4 840 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 COL4A3BPQ9Y5P4 624 aa17.73■□□□□ 0.43
DDX41-214ENST00000512334 MGEA5O60502 916 aa17.72■□□□□ 0.43
DDX41-214ENST00000512334 USO1O60763 962 aaKnown RBP17.72■□□□□ 0.43
DDX41-214ENST00000512334 DGAT1O75907 488 aa17.72■□□□□ 0.43
DDX41-214ENST00000512334 XRCC6P12956 609 aaKnown RBP eCLIP17.72■□□□□ 0.43
DDX41-214ENST00000512334 HTRA4P83105 476 aaPredicted RBP17.72■□□□□ 0.43
DDX41-214ENST00000512334 IL17AQ16552 155 aa17.72■□□□□ 0.43
DDX41-214ENST00000512334 KRT79Q5XKE5 535 aa17.72■□□□□ 0.43
DDX41-214ENST00000512334 ZNF410Q86VK4 478 aa17.72■□□□□ 0.43
DDX41-214ENST00000512334 IGSF22Q8N9C0 903 aa17.72■□□□□ 0.43
DDX41-214ENST00000512334 PRPF31Q8WWY3 499 aaKnown RBP17.72■□□□□ 0.43
DDX41-214ENST00000512334 MTUS1Q9ULD2 1270 aa17.72■□□□□ 0.43
DDX41-214ENST00000512334 LRFN2Q9ULH4 789 aa17.72■□□□□ 0.43
DDX41-214ENST00000512334 STK24Q9Y6E0 443 aa17.72■□□□□ 0.43
DDX41-214ENST00000512334 LINC01553A4QN01 128 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 VWA3AA6NCI4 1184 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 PP2D1A8MPX8 630 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 STX6O43752 255 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 STAG3L1P0CL83 205 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 SRGAP2CP0DJJ0 459 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 ZSCAN20P17040 1043 aaPredicted RBP17.71■□□□□ 0.43
DDX41-214ENST00000512334 MUTP22033 750 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 SFPQP23246 707 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDX41-214ENST00000512334 LAMTOR4Q0VGL1 99 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 FAM43BQ6ZT52 329 aaPredicted RBP17.71■□□□□ 0.43
DDX41-214ENST00000512334 NPAS4Q8IUM7 802 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 INO80BQ9C086 356 aaPredicted RBP17.71■□□□□ 0.43
DDX41-214ENST00000512334 XPNPEP1Q9NQW7 623 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 C1orf112Q9NSG2 853 aa17.71■□□□□ 0.43
DDX41-214ENST00000512334 TTC3P53804 2025 aa17.71■□□□□ 0.42
DDX41-214ENST00000512334 MYO9BQ13459 2157 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 ARHGEF35A5YM69 484 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 ASAP2O43150 1006 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 BMP15O95972 392 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 IGFBP4P22692 258 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 CDC25AP30304 524 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 SARSP49591 514 aaKnown RBP17.7■□□□□ 0.42
DDX41-214ENST00000512334 ZRSR1Q15695 479 aaKnown RBP17.7■□□□□ 0.42
DDX41-214ENST00000512334 ECM1Q16610 540 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 MAEAQ7L5Y9 396 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 SPRED2Q7Z698 418 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 RNF149Q8NC42 400 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 SPRYD3Q8NCJ5 442 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 TGS1Q96RS0 853 aaKnown RBP17.7■□□□□ 0.42
DDX41-214ENST00000512334 RGS18Q9NS28 235 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 DDX19AQ9NUU7 478 aaKnown RBP17.7■□□□□ 0.42
DDX41-214ENST00000512334 DBR1Q9UK59 544 aaKnown RBP17.7■□□□□ 0.42
DDX41-214ENST00000512334 KIAA1024Q9UPX6 916 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 MTMR6Q9Y217 621 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 PCDHB7Q9Y5E2 793 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 CDH23Q9H251 3354 aa17.7■□□□□ 0.42
DDX41-214ENST00000512334 RFXAPO00287 272 aa17.69■□□□□ 0.42
DDX41-214ENST00000512334 RESTQ13127 1097 aa17.69■□□□□ 0.42
DDX41-214ENST00000512334 MXD4Q14582 209 aaPredicted RBP17.69■□□□□ 0.42
DDX41-214ENST00000512334 SF3A1Q15459 793 aaKnown RBP17.69■□□□□ 0.42
DDX41-214ENST00000512334 ARL6IP4Q66PJ3 421 aaKnown RBP17.69■□□□□ 0.42
DDX41-214ENST00000512334 SLC24A5Q71RS6 500 aa17.69■□□□□ 0.42
DDX41-214ENST00000512334 CATSPER4Q7RTX7 472 aa17.69■□□□□ 0.42
DDX41-214ENST00000512334 FIBCD1Q8N539 461 aa17.69■□□□□ 0.42
DDX41-214ENST00000512334 SP7Q8TDD2 431 aaPredicted RBP17.69■□□□□ 0.42
DDX41-214ENST00000512334 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
DDX41-214ENST00000512334 ADGRA3Q8IWK6 1321 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms