RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PRC1O43663 620 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 CXCL14O95715 111 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 EOMESO95936 686 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 CHMLP26374 656 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 GNAQP50148 359 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 METAP2P50579 478 aaKnown RBP eCLIP21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 ANGPT1Q15389 498 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 SWSAP1Q6NVH7 229 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 RNF169Q8NCN4 708 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 HELQQ8TDG4 1101 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 SLC22A17Q8WUG5 538 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 BCL7CQ8WUZ0 217 aaPredicted RBP21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 RMDN1Q96DB5 314 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 ZNF302Q9NR11 478 aa21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 DBR1Q9UK59 544 aaKnown RBP21.65■■□□□ 1.06
HMGCS1-206ENST00000511774 KMT2BQ9UMN6 2715 aaPredicted RBP21.64■■□□□ 1.06
HMGCS1-206ENST00000511774 TMTC3Q6ZXV5 915 aa21.64■■□□□ 1.05
HMGCS1-206ENST00000511774 TRMT1LQ7Z2T5 733 aaKnown RBP21.64■■□□□ 1.05
HMGCS1-206ENST00000511774 METTL13Q8N6R0 699 aa21.64■■□□□ 1.05
HMGCS1-206ENST00000511774 LINC01465Q8N7H1 131 aa21.64■■□□□ 1.05
HMGCS1-206ENST00000511774 ANO3Q9BYT9 981 aa21.64■■□□□ 1.05
HMGCS1-206ENST00000511774 ZBP1Q9H171 429 aa21.64■■□□□ 1.05
HMGCS1-206ENST00000511774 USTQ9Y2C2 406 aa21.64■■□□□ 1.05
HMGCS1-206ENST00000511774 HOXA2O43364 376 aa21.63■■□□□ 1.05
HMGCS1-206ENST00000511774 FGFR4P22455 802 aa21.63■■□□□ 1.05
HMGCS1-206ENST00000511774 CA8P35219 290 aa21.63■■□□□ 1.05
HMGCS1-206ENST00000511774 BCAR1P56945 870 aa21.63■■□□□ 1.05
HMGCS1-206ENST00000511774 NLRP11P59045 1033 aaKnown RBP21.63■■□□□ 1.05
HMGCS1-206ENST00000511774 FAM160B1Q5W0V3 765 aa21.63■■□□□ 1.05
HMGCS1-206ENST00000511774 TMC5Q6UXY8 1006 aa21.63■■□□□ 1.05
HMGCS1-206ENST00000511774 DTWD2Q8NBA8 298 aa21.63■■□□□ 1.05
HMGCS1-206ENST00000511774 CYP26B1Q9NR63 512 aa21.63■■□□□ 1.05
HMGCS1-206ENST00000511774 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 FAM86B1E9PN63 330 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 FAM86B2P0C5J1 330 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 ATAT1Q5SQI0 421 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 TTC22Q5TAA0 569 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 NFXL1Q6ZNB6 911 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 ABI1Q8IZP0 508 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 VPS52Q8N1B4 723 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 PLCD3Q8N3E9 789 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 VN1R3Q9BXE9 311 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 RIC8AQ9NPQ8 531 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 FANCMQ8IYD8 2048 aa21.62■■□□□ 1.05
HMGCS1-206ENST00000511774 DOCK8Q8NF50 2099 aa21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 IGLV3-22A0A075B6J6 115 aa21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 ADAMTS3O15072 1205 aa21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 SGSM2O43147 1006 aa21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 NARSO43776 548 aaKnown RBP21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 SREBF1P36956 1147 aa21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 LRRC71Q8N4P6 559 aa21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 MAP4K1Q92918 833 aa21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 LRRC2Q9BYS8 371 aa21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 DZANK1Q9NVP4 752 aa21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 MAFBQ9Y5Q3 323 aaPredicted RBP21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 RBM8AQ9Y5S9 174 aaKnown RBP21.61■■□□□ 1.05
HMGCS1-206ENST00000511774 CACNA1IQ9P0X4 2223 aa21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 CNTNAP5Q8WYK1 1306 aa21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 CCDC69A6NI79 296 aa21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 B4GALT3O60512 393 aa21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 N4BP1O75113 896 aaKnown RBP21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 CASC1Q6TDU7 716 aa21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 SIX5Q8N196 739 aa21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 BBXQ8WY36 941 aaPredicted RBP21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 KCNK12Q9HB15 430 aa21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 DUSP12Q9UNI6 340 aa21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 ACACBO00763 2458 aa21.6■■□□□ 1.05
HMGCS1-206ENST00000511774 A0A0U1RQF3 1178 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 CSDE1O75534 798 aaKnown RBP21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 CTSAP10619 480 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 ZSCAN20P17040 1043 aaPredicted RBP21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 EIF4BP23588 611 aaKnown RBP21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 CLK2P49760 499 aaKnown RBP21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 FUT2Q10981 343 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 TDGQ13569 410 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 MIS18BP1Q6P0N0 1132 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 PLA2G4DQ86XP0 818 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 CKAP2LQ8IYA6 745 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 FANCBQ8NB91 859 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 AKT3Q9Y243 479 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 IRAK3Q9Y616 596 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 R4GN57 208 aa21.59■■□□□ 1.05
HMGCS1-206ENST00000511774 KRBA1A5PL33 1030 aa21.58■■□□□ 1.05
HMGCS1-206ENST00000511774 MEIS3P2A8K0S8 358 aa21.58■■□□□ 1.05
HMGCS1-206ENST00000511774 NAPAP54920 295 aa21.58■■□□□ 1.05
HMGCS1-206ENST00000511774 EFCAB12Q6NXP0 572 aa21.58■■□□□ 1.05
HMGCS1-206ENST00000511774 NIPA1Q7RTP0 329 aa21.58■■□□□ 1.05
HMGCS1-206ENST00000511774 GPR149Q86SP6 731 aa21.58■■□□□ 1.05
HMGCS1-206ENST00000511774 CRYGNQ8WXF5 182 aa21.58■■□□□ 1.05
HMGCS1-206ENST00000511774 TMEM169Q96HH4 297 aa21.58■■□□□ 1.05
HMGCS1-206ENST00000511774 MTA3Q9BTC8 594 aa21.58■■□□□ 1.05
HMGCS1-206ENST00000511774 IPO5O00410 1097 aaKnown RBP21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 ZNF862O60290 1169 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 ZC3H11AO75152 810 aaKnown RBP eCLIP21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 FOSP01100 380 aaPredicted RBP21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 DARSP14868 501 aaKnown RBP21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 LIFRP42702 1097 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 ALDH7A1P49419 539 aaKnown RBP21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 GPC3P51654 580 aa21.57■■□□□ 1.04
HMGCS1-206ENST00000511774 ADCY7P51828 1080 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms