RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 N4BP3O15049 544 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 PRKCBP05771 671 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 DLATP10515 647 aaKnown RBP13.65□□□□□ -0.22
LIN54-210ENST00000510877 ZNF792Q3KQV3 632 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 MSANTD4Q8NCY6 345 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 MSTO1Q9BUK6 570 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 TNMDQ9H2S6 317 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 PRMT7Q9NVM4 692 aaPredicted RBP13.65□□□□□ -0.22
LIN54-210ENST00000510877 EVX2Q03828 476 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 ELAVL2Q12926 359 aaKnown RBP13.65□□□□□ -0.22
LIN54-210ENST00000510877 PTK7Q13308 1070 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 SCN4BQ8IWT1 228 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 SUGP1Q8IWZ8 645 aaKnown RBP13.65□□□□□ -0.22
LIN54-210ENST00000510877 SLC38A7Q9NVC3 462 aa13.65□□□□□ -0.22
LIN54-210ENST00000510877 TOGARAM1Q9Y4F4 1720 aa13.65□□□□□ -0.23
LIN54-210ENST00000510877 NUP98P52948 1817 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 EMC2Q15006 297 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 CNKSR3Q6P9H4 555 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 ZNF384Q8TF68 577 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 CCDC127Q96BQ5 260 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 AIFM3Q96NN9 605 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 CELF4Q9BZC1 486 aaKnown RBP13.64□□□□□ -0.23
LIN54-210ENST00000510877 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.64□□□□□ -0.23
LIN54-210ENST00000510877 ARP10275 920 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 EPB41P11171 864 aaKnown RBP13.64□□□□□ -0.23
LIN54-210ENST00000510877 CD52P31358 61 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 FAM177A1Q8N128 213 aaPredicted RBP13.64□□□□□ -0.23
LIN54-210ENST00000510877 MMP1P03956 469 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 CYBAP13498 195 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 CDC27P30260 824 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 GUCY1A2P33402 732 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 MFSD5Q6N075 450 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 UBXN4Q92575 508 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 ACAP3Q96P50 834 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 TGS1Q96RS0 853 aaKnown RBP13.64□□□□□ -0.23
LIN54-210ENST00000510877 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
LIN54-210ENST00000510877 CALUO43852 315 aaPredicted RBP13.63□□□□□ -0.23
LIN54-210ENST00000510877 CCDC192P0DO97 292 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 TRAPPC12Q8WVT3 735 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 EIF2AK1Q9BQI3 630 aaKnown RBP13.63□□□□□ -0.23
LIN54-210ENST00000510877 PARVGQ9HBI0 331 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 SBF2Q86WG5 1849 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 ATP8B3O60423 1300 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 HUS1O60921 280 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 CYP2J2P51589 502 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 DCAF17Q5H9S7 520 aaPredicted RBP13.63□□□□□ -0.23
LIN54-210ENST00000510877 ATAT1Q5SQI0 421 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 MORN1Q5T089 497 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
LIN54-210ENST00000510877 STOX1Q6ZVD7 989 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 CACNA2D4Q7Z3S7 1137 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 MAF1Q9H063 256 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 RGL1Q9NZL6 768 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 XRCC6P12956 609 aaKnown RBP eCLIP13.63□□□□□ -0.23
LIN54-210ENST00000510877 TIGD5Q53EQ6 642 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 SPECC1Q5M775 1068 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 PLA2G4FQ68DD2 849 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 CNNM4Q6P4Q7 775 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 DYDC1Q8WWB3 177 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 NKX2-4Q9H2Z4 354 aa13.63□□□□□ -0.23
LIN54-210ENST00000510877 ZNHIT6Q9NWK9 470 aaKnown RBP13.63□□□□□ -0.23
LIN54-210ENST00000510877 ESYT2A0FGR8 921 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 TYW5A2RUC4 315 aaKnown RBP13.62□□□□□ -0.23
LIN54-210ENST00000510877 CETN3O15182 167 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 B3GAT3O94766 335 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 TIMP1P01033 207 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 NEFHP12036 1026 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 CLUL1Q15846 466 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 ENOX2Q16206 610 aaKnown RBP13.62□□□□□ -0.23
LIN54-210ENST00000510877 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 AK8Q96MA6 479 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 PRDM12Q9H4Q4 367 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 HESX1Q9UBX0 185 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 PAPPAQ13219 1627 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 POTEMA6NI47 508 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 LAG3P18627 525 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 SNX16P57768 344 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 GOLGA5Q8TBA6 731 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 NOX5Q96PH1 765 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 ACCSQ96QU6 501 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 A0A087WWV3 80 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 XYLBO75191 536 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 SREBF1P36956 1147 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 YWHAEP62258 255 aaKnown RBP13.62□□□□□ -0.23
LIN54-210ENST00000510877 JAG1P78504 1218 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 SURF1Q15526 300 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 HSDL1Q3SXM5 330 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 FAM114A1Q8IWE2 563 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 PGBD3Q8N328 593 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 TBX3O15119 743 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 NPEPPSP55786 919 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 ARHGAP15Q53QZ3 475 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 JAKMIP2Q96AA8 810 aa13.62□□□□□ -0.23
LIN54-210ENST00000510877 MRPL17Q9NRX2 175 aaKnown RBP13.62□□□□□ -0.23
LIN54-210ENST00000510877 GAP43P17677 238 aa13.61□□□□□ -0.23
LIN54-210ENST00000510877 ALDH1A3P47895 512 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms