RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 STXBP5LQ9Y2K9 1186 aa13.12□□□□□ -0.31
HMGXB3-203ENST00000510472 INSL6Q9Y581 213 aa13.12□□□□□ -0.31
HMGXB3-203ENST00000510472 CDH23Q9H251 3354 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 C9IYK1 514 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 NFX1Q12986 1120 aaKnown RBP13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 ODR4Q5SWX8 454 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 DTHD1Q6ZMT9 781 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 FERMT3Q86UX7 667 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 ZNF410Q86VK4 478 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 ERMNQ8TAM6 284 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 TMEM143Q96AN5 459 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 ZNF668Q96K58 619 aaPredicted RBP13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 RC3H2Q9HBD1 1191 aaKnown RBP13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 IFT122Q9HBG6 1241 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 RGS18Q9NS28 235 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 CHD7Q9P2D1 2997 aa13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 MYH9P35579 1960 aaKnown RBP13.11□□□□□ -0.31
HMGXB3-203ENST00000510472 A0A087WZ62 844 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 LINC01553A4QN01 128 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 PP2D1A8MPX8 630 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 ASAP2O43150 1006 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 STX6O43752 255 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 DGAT1O75907 488 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 ARL2P36404 184 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 POLGP54098 1239 aaPredicted RBP13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 POU5F1BQ06416 359 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 EMC2Q15006 297 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 PPP2R2DQ66LE6 453 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 HAUS3Q68CZ6 603 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 FAM117BQ6P1L5 589 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 RHPN2Q8IUC4 686 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 KSR1Q8IVT5 923 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 PSPC1Q8WXF1 523 aaKnown RBP13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 ZNF689Q96CS4 500 aaPredicted RBP13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 FDXACB1Q9BRP7 624 aaPredicted RBP13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 ZBED2Q9BTP6 218 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 GCOM2Q9BZD3 368 aaPredicted RBP13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 COL4A3BPQ9Y5P4 624 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 STK24Q9Y6E0 443 aa13.1□□□□□ -0.31
HMGXB3-203ENST00000510472 CSDE1O75534 798 aaKnown RBP13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 DGKIO75912 1065 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 BMP15O95972 392 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 LINC00271P0C7V0 271 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 CDC25AP30304 524 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 CCT6AP40227 531 aaKnown RBP13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 LAMTOR4Q0VGL1 99 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 ADGRE1Q14246 886 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 PTPAQ15257 358 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 HYIQ5T013 277 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 SLC24A5Q71RS6 500 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 HSCBQ8IWL3 235 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 TCP11Q8WWU5 503 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 MYLIPQ8WY64 445 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 MTRQ99707 1265 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 ADAM2Q99965 735 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 RAB34Q9BZG1 259 aa13.09□□□□□ -0.31
HMGXB3-203ENST00000510472 WDR81Q562E7 1941 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 EPOPA6NHQ4 379 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 UPP2O95045 317 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 CYP11B2P19099 503 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 FGFR4P22455 802 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 SARSP49591 514 aaKnown RBP13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 ERVK-21P61565 698 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 MXD4Q14582 209 aaPredicted RBP13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 NPAS4Q8IUM7 802 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 KCTD17Q8N5Z5 321 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 ASAP3Q8TDY4 903 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 TRAIPQ9BWF2 469 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 INO80BQ9C086 356 aaPredicted RBP13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 PRDM12Q9H4Q4 367 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 ZSCAN16Q9H4T2 348 aaPredicted RBP13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 MINDY3Q9H8M7 445 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 ATP6V0A4Q9HBG4 840 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 CHST12Q9NRB3 414 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 C1orf112Q9NSG2 853 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 KIAA1024Q9UPX6 916 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 CLIC4Q9Y696 253 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 MORC2Q9Y6X9 1032 aaPredicted RBP13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 SIP14410 1827 aa13.08□□□□□ -0.32
HMGXB3-203ENST00000510472 COL6A3P12111 3177 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 EVPLQ92817 2033 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 VWA3AA6NCI4 1184 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 SRGAP2CP0DJJ0 459 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 PDIA4P13667 645 aaKnown RBP13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 POU3F3P20264 500 aaPredicted RBP13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 GLRA2P23416 452 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 PTENP60484 403 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 GRIN1Q05586 938 aa13.07□□□□□ -0.32
HMGXB3-203ENST00000510472 KRT79Q5XKE5 535 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms