RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ANKRD54Q6NXT1 300 aa18.02■□□□□ 0.48
RAB40C-202ENST00000509637 KANK3Q6NY19 840 aa18.02■□□□□ 0.48
RAB40C-202ENST00000509637 B3GNT9Q6UX72 402 aa18.02■□□□□ 0.48
RAB40C-202ENST00000509637 REXO1Q8N1G1 1221 aaKnown RBP18.02■□□□□ 0.48
RAB40C-202ENST00000509637 JAKMIP1Q96N16 626 aaKnown RBP18.02■□□□□ 0.48
RAB40C-202ENST00000509637 GLT8D2Q9H1C3 349 aa18.02■□□□□ 0.48
RAB40C-202ENST00000509637 KMT2EQ8IZD2 1858 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 MEIS3P2A8K0S8 358 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 NT5C1B-RDH14C9J2C7 533 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 DTNBO60941 627 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 PDGFBP01127 241 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-202ENST00000509637 EIF4BP23588 611 aaKnown RBP18.01■□□□□ 0.47
RAB40C-202ENST00000509637 HSPA4P34932 840 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 VCPP55072 806 aaKnown RBP18.01■□□□□ 0.47
RAB40C-202ENST00000509637 NPY5RQ15761 445 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 LLGL2Q6P1M3 1020 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 TMEM173Q86WV6 379 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-202ENST00000509637 SMAP1Q8IYB5 467 aaPredicted RBP18.01■□□□□ 0.47
RAB40C-202ENST00000509637 SLC5A5Q92911 643 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 PPP2R3CQ969Q6 453 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 PBXIP1Q96AQ6 731 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 C6orf50Q9HD87 102 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 DISC1Q9NRI5 854 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 AKT3Q9Y243 479 aa18.01■□□□□ 0.47
RAB40C-202ENST00000509637 B4GALT3O60512 393 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 CDC45O75419 566 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 PSMD10O75832 226 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 OATP04181 439 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 DARSP14868 501 aaKnown RBP18■□□□□ 0.47
RAB40C-202ENST00000509637 LAG3P18627 525 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 SP100P23497 879 aaPredicted RBP18■□□□□ 0.47
RAB40C-202ENST00000509637 PDIA3P30101 505 aaKnown RBP18■□□□□ 0.47
RAB40C-202ENST00000509637 TECP42680 631 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 CCT2P78371 535 aaKnown RBP18■□□□□ 0.47
RAB40C-202ENST00000509637 PRKCEQ02156 737 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 KRT32Q14532 448 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 SLC39A11Q8N1S5 342 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 FBXL16Q8N461 479 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 BCL7CQ8WUZ0 217 aaPredicted RBP18■□□□□ 0.47
RAB40C-202ENST00000509637 MFSD14AQ96MC6 490 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 TCF25Q9BQ70 676 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 LARP6Q9BRS8 491 aaKnown RBP18■□□□□ 0.47
RAB40C-202ENST00000509637 KCNH6Q9H252 994 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 SMOC2Q9H3U7 446 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 AAASQ9NRG9 546 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 LZTS1Q9Y250 596 aa18■□□□□ 0.47
RAB40C-202ENST00000509637 M0R2N6 131 aa17.99■□□□□ 0.47
RAB40C-202ENST00000509637 MAGEB2O15479 319 aa17.99■□□□□ 0.47
RAB40C-202ENST00000509637 CHMP2AO43633 222 aa17.99■□□□□ 0.47
RAB40C-202ENST00000509637 RPS6KB1P23443 525 aa17.99■□□□□ 0.47
RAB40C-202ENST00000509637 EVCP57679 992 aa17.99■□□□□ 0.47
RAB40C-202ENST00000509637 SETQ01105 290 aaPredicted RBP17.99■□□□□ 0.47
RAB40C-202ENST00000509637 HELQQ8TDG4 1101 aa17.99■□□□□ 0.47
RAB40C-202ENST00000509637 CCDC136Q96JN2 1154 aa17.99■□□□□ 0.47
RAB40C-202ENST00000509637 AIFM3Q96NN9 605 aa17.99■□□□□ 0.47
RAB40C-202ENST00000509637 CDCA3Q99618 268 aaPredicted RBP17.99■□□□□ 0.47
RAB40C-202ENST00000509637 SLC26A6Q9BXS9 759 aa17.99■□□□□ 0.47
RAB40C-202ENST00000509637 IGKV6-21A0A0C4DH24 114 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 A0A0U1RQF3 1178 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 C2orf71A6NGG8 1288 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 WDR64B1ANS9 1081 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 TDP2O95551 362 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 WEE2P0C1S8 567 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 IFNAR1P17181 557 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 TOB2Q14106 344 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-202ENST00000509637 LONRF3Q496Y0 759 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 ODR4Q5SWX8 454 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 RNF169Q8NCN4 708 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 AUTS2Q8WXX7 1259 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 LPPQ93052 612 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 SAMM50Q9Y512 469 aa17.98■□□□□ 0.47
RAB40C-202ENST00000509637 CLASP2O75122 1294 aaKnown RBP17.97■□□□□ 0.47
RAB40C-202ENST00000509637 HMGB1P09429 215 aaKnown RBP17.97■□□□□ 0.47
RAB40C-202ENST00000509637 PDE12Q6L8Q7 609 aaKnown RBP17.97■□□□□ 0.47
RAB40C-202ENST00000509637 BLOC1S2Q6QNY1 142 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 FAM43BQ6ZT52 329 aaPredicted RBP17.97■□□□□ 0.47
RAB40C-202ENST00000509637 KSR1Q8IVT5 923 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 FBXL6Q8N531 539 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 C12orf76Q8N812 135 aaPredicted RBP17.97■□□□□ 0.47
RAB40C-202ENST00000509637 MRPL43Q8N983 215 aaKnown RBP17.97■□□□□ 0.47
RAB40C-202ENST00000509637 ZNF579Q8NAF0 562 aaKnown RBP17.97■□□□□ 0.47
RAB40C-202ENST00000509637 TBCKQ8TEA7 893 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 ZNF558Q96NG5 402 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 RIT2Q99578 217 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 VN1R3Q9BXE9 311 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 RNF26Q9BY78 433 aaPredicted RBP17.97■□□□□ 0.47
RAB40C-202ENST00000509637 POMKQ9H5K3 350 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 SPG21Q9NZD8 308 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 HCFC2Q9Y5Z7 792 aa17.97■□□□□ 0.47
RAB40C-202ENST00000509637 A0A087WZ62 844 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 CCDC196A0A1B0GTZ2 297 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 EML1O00423 815 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 GNA11P29992 359 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 USP11P51784 963 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 AFF1P51825 1210 aaKnown RBP17.96■□□□□ 0.47
RAB40C-202ENST00000509637 BCAR1P56945 870 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 SIGLEC14Q08ET2 396 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 CENPQQ7L2Z9 268 aaPredicted RBP17.96■□□□□ 0.47
RAB40C-202ENST00000509637 FAM167AQ96KS9 214 aa17.96■□□□□ 0.47
RAB40C-202ENST00000509637 MBOAT7Q96N66 472 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms