RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 MTMR6Q9Y217 621 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 KIAA1671Q9BY89 1806 aa8.12□□□□□ -1.11
TOPBP1-207ENST00000509162 NRCAMQ92823 1304 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 A0A1W2PPC1 479 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 TBX3O15119 743 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 MED24O75448 989 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 SPATA31C1P0DKV0 1188 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 ATP2B1P20020 1258 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 MCM7P33993 719 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 THPOP40225 353 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 MCM2P49736 904 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 CLCN3P51790 818 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 NPEPPSP55786 919 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 TMEM62Q0P6H9 643 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 LPIN1Q14693 890 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 ZNF174Q15697 407 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 LRIT3Q3SXY7 679 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 NCAPH2Q6IBW4 605 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 MIS18BP1Q6P0N0 1132 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 PDXDC2PQ6P474 469 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 MTHFD1LQ6UB35 978 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 Q7L0L9 218 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 OTOP2Q7RTS6 562 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 TRMT1LQ7Z2T5 733 aaKnown RBP8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 MIER3Q7Z3K6 550 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 RPAINQ86UA6 219 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 FERMT3Q86UX7 667 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 KIAA0319LQ8IZA0 1049 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 LRRC71Q8N4P6 559 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 FAM184AQ8NB25 1140 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 DNAJB3Q8WWF6 145 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 HERVK_113Q902F9 699 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 DYDC2Q96IM9 177 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 PPP1R16BQ96T49 567 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 LXNQ9BS40 222 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 MMTAG2Q9BU76 263 aaKnown RBP8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 SEZ6LQ9BYH1 1024 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 FAM49AQ9H0Q0 323 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 XPNPEP1Q9NQW7 623 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 PCDHA10Q9Y5I2 948 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 VCANP13611 3396 aa8.11□□□□□ -1.11
TOPBP1-207ENST00000509162 COL1A2P08123 1366 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 EVPLQ92817 2033 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 IGKV6-21A0A0C4DH24 114 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 LCHNA4D1U4 455 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 BACH1O14867 736 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 MGEA5O60502 916 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 PSAPP07602 524 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 OR52Z1P0C646 297 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 GHRP10912 638 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 MYOGP15173 224 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 XBP1P17861 261 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 SYT1P21579 422 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 JAK3P52333 1124 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 WDR5P61964 334 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 CYP4A11Q02928 519 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 PPIGQ13427 754 aaKnown RBP eCLIP8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 TRIM29Q14134 588 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 CTTNQ14247 550 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 CALCRLQ16602 461 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 PLEKHG4Q58EX7 1191 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 FBXO47Q5MNV8 452 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 KCNK18Q7Z418 384 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 RDM1Q8NG50 284 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 PBXIP1Q96AQ6 731 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 ZNF668Q96K58 619 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 RNPC3Q96LT9 517 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 FAM20AQ96MK3 541 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 HSD17B14Q9BPX1 270 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 LBHD1Q9BQE6 289 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 TMX1Q9H3N1 280 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 RC3H2Q9HBD1 1191 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 PRKAG2Q9UGJ0 569 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 SMC3Q9UQE7 1217 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 CDY2AQ9Y6F7 541 aa8.1□□□□□ -1.11
TOPBP1-207ENST00000509162 SMIM35A0A1B0GVV1 85 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 EPOPA6NHQ4 379 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 HBP1O60381 514 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 GPR32O75388 356 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 SLITRK3O94933 977 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 ADH1BP00325 375 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 VTNP04004 478 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 EDN1P05305 212 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 LINC00271P0C7V0 271 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 KLRC1P26715 233 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 SFNP31947 248 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 TXKP42681 527 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 RABGGTBP53611 331 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 MRPS6P82932 125 aaKnown RBP8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 ATP2C1P98194 919 aaPredicted RBP8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 PDE4CQ08493 712 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 BFSP2Q13515 415 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 PTPAQ15257 358 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 EPHA7Q15375 998 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 TMEM266Q2M3C6 531 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 MTERF2Q49AM1 385 aa8.09□□□□□ -1.11
TOPBP1-207ENST00000509162 FAM160B1Q5W0V3 765 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms