RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 C6orf222P0C671 652 aaPredicted RBP8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 MATR3P43243 847 aaKnown RBP eCLIP8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 CTAG1AP78358 180 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 C17orf67Q0P5P2 114 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TRDNQ13061 729 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 STARD3Q14849 445 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 CEP55Q53EZ4 464 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 JMJD6Q6NYC1 403 aaPredicted RBP8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TXNDC11Q6PKC3 985 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 FKBP9P1Q75LS8 142 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 ZNF804AQ7Z570 1209 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TMEM110Q86TL2 294 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TRIM74Q86UV6 250 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TRIM73Q86UV7 250 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 RAB11FIP4Q86YS3 637 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 CPOQ8IVL8 374 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 C2orf69Q8N8R5 385 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 PLBD2Q8NHP8 589 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TAOK3Q9H2K8 898 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TMEM60Q9H2L4 133 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 PCDHGB4Q9UN71 923 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 RRBP1Q9P2E9 1410 aaKnown RBP8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 ARHGAP35Q9NRY4 1499 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 MAGEB6P1A0A0J9YX57 407 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 DDX39AO00148 427 aaKnown RBP8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 SIN3BO75182 1162 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 ADCY5O95622 1261 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 SCG2P13521 617 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 TNNT1P13805 278 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 AKAP5P24588 427 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 TECP42680 631 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 ZYXQ15942 572 aaKnown RBP8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 HSF5Q4G112 596 aaPredicted RBP8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 SH3PXD2AQ5TCZ1 1133 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 ELMSAN1Q6PJG2 1045 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 TTLL7Q6ZT98 887 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 NLRP13Q86W25 1043 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 SIAH1Q8IUQ4 282 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 PRR18Q8N4B5 295 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 ZDHHC15Q96MV8 337 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 CRACR2AQ9BSW2 395 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 B3GNT5Q9BYG0 378 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 EMC7Q9NPA0 242 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 CABP1Q9NZU7 370 aa8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 PTBP2Q9UKA9 531 aaKnown RBP8.24□□□□□ -1.09
PDGFRA-206ENST00000508170 A0A0B4J269 797 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 KRT87PA6NCN2 255 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 DAPK3O43293 454 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 MTSS1O43312 755 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 CEP104O60308 925 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 PHACTR2O75167 634 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 TUSC2O75896 110 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 DDHD2O94830 711 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 SRGAP2BP0DMP2 458 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 FGFR1P11362 822 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 SUMO1P63165 101 aaKnown RBP8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 CCDC173Q0VFZ6 552 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 PIK3R6Q5UE93 754 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 APOA5Q6Q788 366 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 CCDC80Q76M96 950 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 GSTCDQ8NEC7 633 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 OR6C4Q8NGE1 309 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 TMEM41AQ96HV5 264 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 C7orf26Q96N11 449 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 MXD3Q9BW11 206 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 OXCT2Q9BYC2 517 aaPredicted RBP8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 INCENPQ9NQS7 918 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 ADGRE2Q9UHX3 823 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 RPS6KA6Q9UK32 745 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 EDARQ9UNE0 448 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 TRIM35Q9UPQ4 493 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 DHX57Q6P158 1386 aaKnown RBP8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 GOLGA6L10A0A0M3HER8 536 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 SGK1O00141 431 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 FMO6PO60774 539 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 RTN3O95197 1032 aaPredicted RBP8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 INHAP05111 366 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 RPLP1P05386 114 aaKnown RBP8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 HARSP12081 509 aaKnown RBP8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 CAPN2P17655 700 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 HSD17B2P37059 387 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 USP8P40818 1118 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 RNASE9P60153 205 aaKnown RBP8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 BEX3Q00994 111 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 AUHQ13825 339 aaKnown RBP8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 FAM110CQ1W6H9 321 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 B4GALNT4Q76KP1 1039 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 CAMKK1Q8N5S9 505 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 ATG16L2Q8NAA4 619 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 CLRN3Q8NCR9 226 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 SMC1BQ8NDV3 1235 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 RFFLQ8WZ73 363 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 KRT35Q92764 455 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 MAELQ96JY0 434 aaKnown RBP8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 PPP1R13BQ96KQ4 1090 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 AGXT2Q9BYV1 514 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 SEMA4AQ9H3S1 761 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 PDE7BQ9NP56 450 aa8.23□□□□□ -1.09
PDGFRA-206ENST00000508170 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms