RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 GMPSP49915 693 aaPredicted RBP15.83■□□□□ 0.12
DDX41-208ENST00000507955 NPEPPSP55786 919 aa15.83■□□□□ 0.12
DDX41-208ENST00000507955 SOX10P56693 466 aa15.83■□□□□ 0.12
DDX41-208ENST00000507955 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
DDX41-208ENST00000507955 DALRD3Q5D0E6 543 aaKnown RBP15.83■□□□□ 0.12
DDX41-208ENST00000507955 PLA2G4FQ68DD2 849 aa15.83■□□□□ 0.12
DDX41-208ENST00000507955 DLK2Q6UY11 383 aa15.83■□□□□ 0.12
DDX41-208ENST00000507955 SLC38A10Q9HBR0 1119 aa15.83■□□□□ 0.12
DDX41-208ENST00000507955 FEZ2Q9UHY8 353 aaPredicted RBP15.83■□□□□ 0.12
DDX41-208ENST00000507955 TESPA1A2RU30 521 aaPredicted RBP15.82■□□□□ 0.12
DDX41-208ENST00000507955 ZSCAN5CA6NGD5 496 aaPredicted RBP15.82■□□□□ 0.12
DDX41-208ENST00000507955 BAG6P46379 1132 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 ZNF131P52739 623 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 SETQ01105 290 aaPredicted RBP15.82■□□□□ 0.12
DDX41-208ENST00000507955 SP4Q02446 784 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 ATG4CQ96DT6 458 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 AGO4Q9HCK5 861 aaKnown RBP15.82■□□□□ 0.12
DDX41-208ENST00000507955 PLCB1Q9NQ66 1216 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 MYH11P35749 1972 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 FER1L6Q2WGJ9 1857 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 GRID2IPA4D2P6 1211 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 TRIM66O15016 1216 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 EXOC3O60645 756 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 PEX10O60683 326 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 NOP2P46087 812 aaKnown RBP15.82■□□□□ 0.12
DDX41-208ENST00000507955 AARSP49588 968 aaKnown RBP eCLIP15.82■□□□□ 0.124e-6■■□□□ 13.1
DDX41-208ENST00000507955 PRKG1Q13976 671 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 HSP90B2PQ58FF3 399 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 KIFC3Q9BVG8 833 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 METTL14Q9HCE5 456 aaKnown RBP15.82■□□□□ 0.12
DDX41-208ENST00000507955 NAGPAQ9UK23 515 aa15.82■□□□□ 0.12
DDX41-208ENST00000507955 WDR46O15213 610 aaKnown RBP15.81■□□□□ 0.12
DDX41-208ENST00000507955 EIF3DO15371 548 aaKnown RBP eCLIP15.81■□□□□ 0.12
DDX41-208ENST00000507955 FMO5P49326 533 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 ARHGAP44Q17R89 818 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 ALKBH5Q6P6C2 394 aaKnown RBP15.81■□□□□ 0.12
DDX41-208ENST00000507955 RMDN3Q96TC7 470 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 RIT2Q99578 217 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 CBWD1Q9BRT8 395 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 MED4Q9NPJ6 270 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 TARSL2A2RTX5 802 aaKnown RBP15.81■□□□□ 0.12
DDX41-208ENST00000507955 AGPSO00116 658 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 SLC16A3O15427 465 aaKnown RBP15.81■□□□□ 0.12
DDX41-208ENST00000507955 PGM5Q15124 567 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 HS2ST1Q7LGA3 356 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 VIPAS39Q9H9C1 493 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 CNOT7Q9UIV1 285 aaKnown RBP15.81■□□□□ 0.12
DDX41-208ENST00000507955 RPTORQ8N122 1335 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 ESYT3A0FGR9 886 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 EVI5O60447 810 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 CCNE2O96020 404 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 RARRES1P49788 294 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 JAM2P57087 298 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 CCNI2Q6ZMN8 369 aaPredicted RBP15.81■□□□□ 0.12
DDX41-208ENST00000507955 GLYCTKQ8IVS8 523 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 U2AF1L4Q8WU68 220 aaKnown RBP15.81■□□□□ 0.12
DDX41-208ENST00000507955 KIAA1683Q9H0B3 1180 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 UBIAD1Q9Y5Z9 338 aa15.81■□□□□ 0.12
DDX41-208ENST00000507955 ATAD5Q96QE3 1844 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 GOLGA8IPA6NC78 632 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 GOLGA8JA6NMD2 632 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 DDX3XO00571 662 aaKnown RBP eCLIP15.8■□□□□ 0.12
DDX41-208ENST00000507955 BACH1O14867 736 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 P4HBP07237 508 aaKnown RBP15.8■□□□□ 0.12
DDX41-208ENST00000507955 TCP1P17987 556 aaKnown RBP15.8■□□□□ 0.12
DDX41-208ENST00000507955 BAATQ14032 418 aaPredicted RBP15.8■□□□□ 0.12
DDX41-208ENST00000507955 TRADDQ15628 312 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 LRRC31Q6UY01 552 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 PALB2Q86YC2 1186 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 RNF10Q8N5U6 811 aaKnown RBP15.8■□□□□ 0.12
DDX41-208ENST00000507955 FAM84AQ96KN4 292 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 SELENOOQ9BVL4 669 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 DNAJC12Q9UKB3 198 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 PPP1R9AQ9ULJ8 1098 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 FRMD4BQ9Y2L6 1034 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 RGPD3A6NKT7 1758 aaPredicted RBP15.8■□□□□ 0.12
DDX41-208ENST00000507955 RGPD4Q7Z3J3 1758 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 SLC16A4O15374 487 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 YWHABP31946 246 aaKnown RBP15.8■□□□□ 0.12
DDX41-208ENST00000507955 GGCXP38435 758 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 DRAP1Q14919 205 aaPredicted RBP15.8■□□□□ 0.12
DDX41-208ENST00000507955 RPGRIP1Q96KN7 1286 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 ODF2LQ9ULJ1 636 aa15.8■□□□□ 0.12
DDX41-208ENST00000507955 CTDP1Q9Y5B0 961 aaPredicted RBP15.8■□□□□ 0.12
DDX41-208ENST00000507955 A0A0U1RQG5 324 aaPredicted RBP15.79■□□□□ 0.12
DDX41-208ENST00000507955 MYO1CO00159 1063 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 PPP1R37O75864 691 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 PRLRP16471 622 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 GUCY2CP25092 1073 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 HMGCS2P54868 508 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 PEX3P56589 373 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 MEI1Q5TIA1 1274 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 PCNX4Q63HM2 1172 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 PHLDB3Q6NSJ2 640 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 LEKR1Q6ZMV7 388 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 RNF207Q6ZRF8 634 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 ARHGAP27Q6ZUM4 889 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 LNX1Q8TBB1 728 aaPredicted RBP15.79■□□□□ 0.12
DDX41-208ENST00000507955 DMAC2Q9NW81 257 aa15.79■□□□□ 0.12
DDX41-208ENST00000507955 VWA5AO00534 786 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms