RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CPLX2Q6PUV4 134 aaKnown RBP8.01□□□□□ -1.13
CLCN3-206ENST00000507875 VN1R5Q7Z5H4 357 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 NECAB2Q7Z6G3 386 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 FAM83AQ86UY5 434 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 GAS2L3Q86XJ1 694 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 FOXP4Q8IVH2 680 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-206ENST00000507875 MICALL1Q8N3F8 863 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 IGDCC4Q8TDY8 1250 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 TGFBRAP1Q8WUH2 860 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 GTF3C6Q969F1 213 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 CCDC17Q96LX7 622 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 OSBPL5Q9H0X9 879 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-206ENST00000507875 CYP8B1Q9UNU6 501 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 SMC3Q9UQE7 1217 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 JAG2Q9Y219 1238 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 NEDD4P46934 1319 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 CCDC196A0A1B0GTZ2 297 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 GFRA2O00451 464 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 SPINT1O43278 529 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 CDKL5O76039 1030 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 PRKD3O94806 890 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 EPHX2P34913 555 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 ANTXR2P58335 489 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 CXCL9Q07325 125 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 DLGAP5Q15398 846 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 CFAP100Q494V2 611 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 POTEGQ6S5H5 508 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 NLRC3Q7RTR2 1065 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 ZSCAN30Q86W11 494 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 NXPE1Q8N323 547 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 FGD4Q96M96 766 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 UBAC1Q9BSL1 405 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 KRTAP3-3Q9BYR6 98 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 KRTAP3-2Q9BYR7 98 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 CLEC4MQ9H2X3 399 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-206ENST00000507875 EFCC1Q9HA90 598 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 AAASQ9NRG9 546 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 ZSWIM5Q9P217 1185 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 TPCN1Q9ULQ1 816 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
CLCN3-206ENST00000507875 TAF6LQ9Y6J9 622 aa8.01□□□□□ -1.13
CLCN3-206ENST00000507875 MYH4Q9Y623 1939 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 FIGNL2A6NMB9 653 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 B4E1Z4 1266 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 ITGAVP06756 1048 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 CCT2P78371 535 aaKnown RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 WTAPQ15007 396 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 ZKSCAN8Q15776 578 aaPredicted RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 ME3Q16798 604 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 UVSSAQ2YD98 709 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 LCE2DQ5TA82 110 aaPredicted RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 EPM2AIP1Q7L775 607 aaPredicted RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 CMIPQ8IY22 773 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 ZNF444Q8N0Y2 327 aaPredicted RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 TMEM102Q8N9M5 508 aaPredicted RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 BRF1Q92994 677 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 BHMTQ93088 406 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 CHAMP1Q96JM3 812 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 ZHX3Q9H4I2 956 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 KCNH4Q9UQ05 1017 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 ATAD5Q96QE3 1844 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 CCDC69A6NI79 296 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 CHURC1-FNTBB4DL54 471 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 C9IYK1 514 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 PES1O00541 588 aaKnown RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 IFIT3O14879 490 aaKnown RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 TIMM44O43615 452 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 PDIA3P30101 505 aaKnown RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 RAPGEF1Q13905 1077 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 COBLL1Q53SF7 1204 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 C6orf118Q5T5N4 469 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 CAVIN1Q6NZI2 390 aaKnown RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 CYB5R4Q7L1T6 521 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 PCGF5Q86SE9 256 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 SMARCC2Q8TAQ2 1214 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 GPT2Q8TD30 523 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 FAM151AQ8WW52 585 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 PANK2Q9BZ23 570 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 IGFLR1Q9H665 355 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 LY9Q9HBG7 655 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 CASS4Q9NQ75 786 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 RBM28Q9NW13 759 aaKnown RBP8□□□□□ -1.13
CLCN3-206ENST00000507875 PI4KBQ9UBF8 816 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 USP25Q9UHP3 1055 aa8□□□□□ -1.13
CLCN3-206ENST00000507875 TCHHQ07283 1943 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 STK36Q9NRP7 1315 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 PRODHO43272 600 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 LARGE1O95461 756 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 B3GALT4O96024 378 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 PF4V1P10720 104 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 NOVP48745 357 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 ZNF445P59923 1031 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 GABPAQ06546 454 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 PCDH1Q08174 1060 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 HYAL2Q12891 473 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 TNFAIP1Q13829 316 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 NCAPHQ15003 741 aa7.99□□□□□ -1.13
CLCN3-206ENST00000507875 PCBP2Q15366 365 aaKnown RBP eCLIP7.99□□□□□ -1.133e-6■■■■□ 25.7
CLCN3-206ENST00000507875 SEC23AQ15436 765 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms