RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 PSPC1Q8WXF1 523 aaKnown RBP21.54■■□□□ 1.04
LMNA-221ENST00000506981 ZNF668Q96K58 619 aaPredicted RBP21.54■■□□□ 1.04
LMNA-221ENST00000506981 GCOM2Q9BZD3 368 aaPredicted RBP21.54■■□□□ 1.04
LMNA-221ENST00000506981 ADAMTS10Q9H324 1103 aa21.54■■□□□ 1.04
LMNA-221ENST00000506981 GJB5O95377 273 aa21.53■■□□□ 1.04
LMNA-221ENST00000506981 EIF4BP23588 611 aaKnown RBP21.53■■□□□ 1.04
LMNA-221ENST00000506981 MKRN4PQ13434 485 aaPredicted RBP21.53■■□□□ 1.04
LMNA-221ENST00000506981 SF3A1Q15459 793 aaKnown RBP21.53■■□□□ 1.04
LMNA-221ENST00000506981 PPP2R2DQ66LE6 453 aa21.53■■□□□ 1.04
LMNA-221ENST00000506981 NLRP4Q96MN2 994 aa21.53■■□□□ 1.04
LMNA-221ENST00000506981 FAM161BQ96MY7 647 aa21.53■■□□□ 1.04
LMNA-221ENST00000506981 INO80BQ9C086 356 aaPredicted RBP21.53■■□□□ 1.04
LMNA-221ENST00000506981 ERVK-5Q9HDB9 667 aa21.53■■□□□ 1.04
LMNA-221ENST00000506981 DBR1Q9UK59 544 aaKnown RBP21.53■■□□□ 1.04
LMNA-221ENST00000506981 YBX2Q9Y2T7 364 aaKnown RBP21.53■■□□□ 1.04
LMNA-221ENST00000506981 COL4A3BPQ9Y5P4 624 aa21.53■■□□□ 1.04
LMNA-221ENST00000506981 RALGAPA2Q2PPJ7 1873 aa21.52■■□□□ 1.04
LMNA-221ENST00000506981 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.52■■□□□ 1.04
LMNA-221ENST00000506981 ARHGEF35A5YM69 484 aa21.52■■□□□ 1.04
LMNA-221ENST00000506981 UPP2O95045 317 aa21.52■■□□□ 1.04
LMNA-221ENST00000506981 BECN1Q14457 450 aa21.52■■□□□ 1.04
LMNA-221ENST00000506981 TMCO2Q7Z6W1 182 aaPredicted RBP21.52■■□□□ 1.04
LMNA-221ENST00000506981 FAM228AQ86W67 206 aa21.52■■□□□ 1.04
LMNA-221ENST00000506981 TMEM143Q96AN5 459 aa21.52■■□□□ 1.04
LMNA-221ENST00000506981 ZNF576Q9H609 170 aa21.52■■□□□ 1.04
LMNA-221ENST00000506981 ST3GAL5Q9UNP4 418 aa21.52■■□□□ 1.04
LMNA-221ENST00000506981 A0A087WZ62 844 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 DENND3A2RUS2 1198 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 RBAK-RBAKDNI3L0D1 243 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 ASAP2O43150 1006 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 USO1O60763 962 aaKnown RBP21.51■■□□□ 1.03
LMNA-221ENST00000506981 DARSP14868 501 aaKnown RBP21.51■■□□□ 1.03
LMNA-221ENST00000506981 MYOGP15173 224 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 IL17AQ16552 155 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 CDK5RAP3Q96JB5 506 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 RAD9AQ99638 391 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 FDXACB1Q9BRP7 624 aaPredicted RBP21.51■■□□□ 1.03
LMNA-221ENST00000506981 SEMA6BQ9H3T3 888 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 DDX19AQ9NUU7 478 aaKnown RBP21.51■■□□□ 1.03
LMNA-221ENST00000506981 RNF216Q9NWF9 866 aaPredicted RBP21.51■■□□□ 1.03
LMNA-221ENST00000506981 KIAA1024Q9UPX6 916 aa21.51■■□□□ 1.03
LMNA-221ENST00000506981 A0A087WWV3 80 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 PP2D1A8MPX8 630 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 ENPP3O14638 875 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 CA3P07451 260 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 SFPQP23246 707 aaKnown RBP eCLIP21.5■■□□□ 1.03
LMNA-221ENST00000506981 MXD4Q14582 209 aaPredicted RBP21.5■■□□□ 1.03
LMNA-221ENST00000506981 ZRSR1Q15695 479 aaKnown RBP21.5■■□□□ 1.03
LMNA-221ENST00000506981 MCPH1Q8NEM0 835 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 PRPF31Q8WWY3 499 aaKnown RBP21.5■■□□□ 1.03
LMNA-221ENST00000506981 TOP1MTQ969P6 601 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 AK8Q96MA6 479 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 YME1L1Q96TA2 773 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 TSPYL2Q9H2G4 693 aaPredicted RBP21.5■■□□□ 1.03
LMNA-221ENST00000506981 TTYH1Q9H313 450 aaPredicted RBP21.5■■□□□ 1.03
LMNA-221ENST00000506981 C1orf112Q9NSG2 853 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 INSL6Q9Y581 213 aa21.5■■□□□ 1.03
LMNA-221ENST00000506981 FNDC1Q4ZHG4 1894 aaPredicted RBP21.49■■□□□ 1.03
LMNA-221ENST00000506981 LAMA2P24043 3122 aaKnown RBP21.49■■□□□ 1.03
LMNA-221ENST00000506981 STAG3L1P0CL83 205 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 ZSCAN20P17040 1043 aaPredicted RBP21.49■■□□□ 1.03
LMNA-221ENST00000506981 LAMTOR4Q0VGL1 99 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 TFDP1Q14186 410 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 KSR1Q8IVT5 923 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 NT5C3AQ9H0P0 336 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 TMX1Q9H3N1 280 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 XPNPEP1Q9NQW7 623 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 MTMR10Q9NXD2 777 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 LRFN2Q9ULH4 789 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 DNM3Q9UQ16 869 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 CLIC4Q9Y696 253 aa21.49■■□□□ 1.03
LMNA-221ENST00000506981 SRGAP2CP0DJJ0 459 aa21.48■■□□□ 1.03
LMNA-221ENST00000506981 IBSPP21815 317 aaPredicted RBP21.48■■□□□ 1.03
LMNA-221ENST00000506981 CDC25AP30304 524 aa21.48■■□□□ 1.03
LMNA-221ENST00000506981 PHKA2P46019 1235 aa21.48■■□□□ 1.03
LMNA-221ENST00000506981 FAM173BQ6P4H8 233 aa21.48■■□□□ 1.03
LMNA-221ENST00000506981 PADI6Q6TGC4 694 aa21.48■■□□□ 1.03
LMNA-221ENST00000506981 LINC01599Q8WXQ3 324 aa21.48■■□□□ 1.03
LMNA-221ENST00000506981 ZNF396Q96N95 335 aaPredicted RBP21.48■■□□□ 1.03
LMNA-221ENST00000506981 ADAM2Q99965 735 aa21.48■■□□□ 1.03
LMNA-221ENST00000506981 KIAA1671Q9BY89 1806 aa21.48■■□□□ 1.03
LMNA-221ENST00000506981 COL4A4P53420 1690 aaPredicted RBP21.47■■□□□ 1.03
LMNA-221ENST00000506981 COL4A6Q14031 1691 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 LONP1P36776 959 aaKnown RBP21.47■■□□□ 1.03
LMNA-221ENST00000506981 UBA7P41226 1012 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 CEBPZQ03701 1054 aaKnown RBP21.47■■□□□ 1.03
LMNA-221ENST00000506981 ECM1Q16610 540 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 FOXD4L5Q5VV16 416 aaPredicted RBP21.47■■□□□ 1.03
LMNA-221ENST00000506981 SRGAP1Q7Z6B7 1085 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 CABP7Q86V35 215 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 NPAS4Q8IUM7 802 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 RNF149Q8NC42 400 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 RASSF8Q8NHQ8 419 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 FOXD4L4Q8WXT5 416 aaPredicted RBP21.47■■□□□ 1.03
LMNA-221ENST00000506981 CALML4Q96GE6 196 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 POLR3FQ9H1D9 316 aaPredicted RBP21.47■■□□□ 1.03
LMNA-221ENST00000506981 BHMT2Q9H2M3 363 aa21.47■■□□□ 1.03
LMNA-221ENST00000506981 SLC26A4O43511 780 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 EYA4O95677 639 aa21.46■■□□□ 1.03
LMNA-221ENST00000506981 ZSCAN22P10073 491 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms