RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 HOXB8P17481 243 aaPredicted RBP12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 TMOD1P28289 359 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 GNA11P29992 359 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 CIITAP33076 1130 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 PPM1AP35813 382 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 SIGLEC14Q08ET2 396 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 CKAP2LQ8IYA6 745 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 PBXIP1Q96AQ6 731 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 OSMRQ99650 979 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 TCEAL9Q9UHQ7 104 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 PCDHGC5Q9Y5F6 944 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 WDR81Q562E7 1941 aa12.79□□□□□ -0.36
CCHCR1-220ENST00000506831 CD2BP2O95400 341 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 VTNP04004 478 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 FGFR1P11362 822 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 ZSCAN20P17040 1043 aaPredicted RBP12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 EIF4BP23588 611 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 PTPN5P54829 565 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 EVCP57679 992 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 KRT17Q04695 432 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 ANKRD54Q6NXT1 300 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 KCNT2Q6UVM3 1135 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 SUGP1Q8IWZ8 645 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 REXO1Q8N1G1 1221 aaKnown RBP12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 FBXL6Q8N531 539 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 METTL13Q8N6R0 699 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 LINC01465Q8N7H1 131 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 VN1R2Q8NFZ6 395 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 RSPH1Q8WYR4 309 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 CASD1Q96PB1 797 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 MAP7D2Q96T17 732 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 S1PR5Q9H228 398 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 NRBP2Q9NSY0 501 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 GABBR1Q9UBS5 961 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
CCHCR1-220ENST00000506831 CARNS1A5YM72 827 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 WDR64B1ANS9 1081 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 PRPF3O43395 683 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 EOMESO95936 686 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 IBSPP21815 317 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 PDIA3P30101 505 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 METAP2P50579 478 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 NLRP11P59045 1033 aaKnown RBP12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 CDC42EP1Q00587 391 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 EFCAB12Q6NXP0 572 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 ABI1Q8IZP0 508 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 BICD2Q8TD16 824 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 ZNF274Q96GC6 653 aaPredicted RBP12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 RPGRIP1Q96KN7 1286 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 ZNF558Q96NG5 402 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 TCF25Q9BQ70 676 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 ADAMTS10Q9H324 1103 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 LIMCH1Q9UPQ0 1083 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 NID2Q14112 1375 aa12.77□□□□□ -0.37
CCHCR1-220ENST00000506831 A0A0U1RQF3 1178 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 LARGE1O95461 756 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 MCM2P49736 904 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 USP11P51784 963 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 NUBP1P53384 320 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 RBM10P98175 930 aaKnown RBP12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 STK3Q13188 491 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 ME3Q16798 604 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 PRR16Q569H4 304 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 SYCE2Q6PIF2 218 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 LRRC55Q6ZSA7 311 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 ECHDC2Q86YB7 292 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 PRSS33Q8NF86 280 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 CASP10Q92851 521 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 ASIC4Q96FT7 647 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 RIT2Q99578 217 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 IRF2BPLQ9H1B7 796 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 ENTPD7Q9NQZ7 604 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 RNF19AQ9NV58 838 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 DACT1Q9NYF0 836 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 SPG21Q9NZD8 308 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 HCSTQ9UBK5 93 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 AKT3Q9Y243 479 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 SAMM50Q9Y512 469 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 MYO10Q9HD67 2058 aa12.76□□□□□ -0.37
CCHCR1-220ENST00000506831 PFKFB2O60825 505 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 OATP04181 439 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 DARSP14868 501 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 SFNP31947 248 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 TECP42680 631 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 GPC3P51654 580 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 CLCN3P51790 818 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 CCT2P78371 535 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 BMS1Q14692 1282 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 PTPN21Q16825 1174 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 TPRNQ4KMQ1 711 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 IER5LQ5T953 404 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 PLPP4Q5VZY2 271 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 TMC7Q7Z402 723 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 ZNF598Q86UK7 904 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 MRPL43Q8N983 215 aaKnown RBP12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 CCDC148Q8NFR7 591 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 RDM1Q8NG50 284 aa12.75□□□□□ -0.37
CCHCR1-220ENST00000506831 LENG9Q96B70 501 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms