RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CYP27B1O15528 508 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 GCP02774 474 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 MMEP08473 750 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 STAT5BP51692 787 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 GABREP78334 506 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 STILQ15468 1287 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 GRAMD4Q6IC98 578 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 SHCBP1Q8NEM2 672 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 SRPK1Q96SB4 655 aaKnown RBP3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 PCDHA9Q9Y5H5 950 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 SLC26A4O43511 780 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 MOGSQ13724 837 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 NFE2L2Q16236 605 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 FAM209AQ5JX71 171 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 KANK2Q63ZY3 851 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 TMEM200BQ69YZ2 307 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 TRIM68Q6AZZ1 485 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 ADGRE4PQ86SQ3 457 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 JAZF1Q86VZ6 243 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 ADGRG3Q86Y34 549 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 THEMISQ8N1K5 641 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 AMNQ9BXJ7 453 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 ZSWIM4Q9H7M6 989 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 SMURF1Q9HCE7 757 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 PARPBPQ9NWS1 579 aa3.97□□□□□ -1.77
TOPBP1-205ENST00000506779 A0A1W2PRX2 142 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 PRAMEF22A3QJZ6 481 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 FOXP2O15409 715 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 CRTAMO95727 393 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 MPIG6BO95866 241 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 C6orf222P0C671 652 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 MAP3K12Q12852 859 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 C2orf27AQ580R0 203 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 GPR135Q8IZ08 494 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 ZBTB38Q8NAP3 1195 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 CALML6Q8TD86 181 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 ASB15Q8WXK1 588 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 EXOC2Q96KP1 924 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 GBP4Q96PP9 640 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 KANSL2Q9H9L4 492 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 KCNH7Q9NS40 1196 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 CEP72Q9P209 647 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 NDOR1Q9UHB4 597 aa3.96□□□□□ -1.78
TOPBP1-205ENST00000506779 HIP1RO75146 1068 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 RIN1Q13671 783 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 TMEM132BQ14DG7 1078 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 SEC23AQ15436 765 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 FOXB2Q5VYV0 432 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 LILRB2Q8N423 598 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 ERCC4Q92889 916 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 DNAJC7Q99615 494 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 TBX22Q9Y458 520 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 ASB1Q9Y576 335 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 PTCH2Q9Y6C5 1203 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 CCDC180Q9P1Z9 1646 aa3.95□□□□□ -1.78
TOPBP1-205ENST00000506779 ZAR1LA6NP61 321 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 RHOBTB3O94955 611 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 APEX1P27695 318 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 LACTBP83111 547 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 HGFACQ04756 655 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 ADAM15Q13444 863 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 SQSTM1Q13501 440 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 CNGB1Q14028 1251 aaPredicted RBP3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 TMPRSS6Q8IU80 811 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 NOSTRINQ8IVI9 506 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 ANKRD35Q8N283 1001 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 SPATA3Q8NHX4 192 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 MRFAP1L1Q96HT8 127 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 MPHOSPH9Q99550 1183 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 DHRS4Q9BTZ2 278 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 COQ6Q9Y2Z9 468 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 MRPS23Q9Y3D9 190 aaKnown RBP3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 KDM2BQ8NHM5 1336 aa3.94□□□□□ -1.78
TOPBP1-205ENST00000506779 SLC12A8A0AV02 714 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 PMS2P1A4D2B8 440 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 EFCAB14O75071 495 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 H2AFYO75367 372 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 FAM153BP0C7A2 387 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 STAT3P40763 770 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 SESN2P58004 480 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 RRP1BQ14684 758 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 LONRF2Q1L5Z9 754 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 TM4SF20Q53R12 229 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 FSTL4Q6MZW2 842 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 KLHDC10Q6PID8 442 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 ZNF662Q6ZS27 426 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 SH3TC2Q8TF17 1288 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 THAP3Q8WTV1 239 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 RABGGTAQ92696 567 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 GCDHQ92947 438 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 LPPQ93052 612 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 SLC7A6OSQ96CW6 309 aaPredicted RBP3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 RNPC3Q96LT9 517 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 CELF4Q9BZC1 486 aaKnown RBP3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 TMEM260Q9NX78 707 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 SFMBT1Q9UHJ3 866 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 VWA7Q9Y334 891 aa3.93□□□□□ -1.78
TOPBP1-205ENST00000506779 GOLGA8BA8MQT2 603 aa3.92□□□□□ -1.78
TOPBP1-205ENST00000506779 HOXB6P17509 224 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms