RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 HLA-CQ95604 372 aa15.67■□□□□ 0.1
SNHG4-203ENST00000506188 MRPL38Q96DV4 380 aaKnown RBP15.67■□□□□ 0.1
SNHG4-203ENST00000506188 DYDC2Q96IM9 177 aa15.67■□□□□ 0.1
SNHG4-203ENST00000506188 EIF2AK1Q9BQI3 630 aaKnown RBP15.67■□□□□ 0.1
SNHG4-203ENST00000506188 RAB34Q9BZG1 259 aa15.67■□□□□ 0.1
SNHG4-203ENST00000506188 ADAMTS10Q9H324 1103 aa15.67■□□□□ 0.1
SNHG4-203ENST00000506188 ELAC1Q9H777 363 aaKnown RBP15.67■□□□□ 0.1
SNHG4-203ENST00000506188 CHST12Q9NRB3 414 aa15.67■□□□□ 0.1
SNHG4-203ENST00000506188 TMEM161AQ9NX61 479 aa15.67■□□□□ 0.1
SNHG4-203ENST00000506188 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.67■□□□□ 0.1
SNHG4-203ENST00000506188 PCDHB12Q9Y5F1 795 aa15.67■□□□□ 0.1
SNHG4-203ENST00000506188 TRIP12Q14669 1992 aaPredicted RBP15.66■□□□□ 0.1
SNHG4-203ENST00000506188 IGKV6-21A0A0C4DH24 114 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 EPOPA6NHQ4 379 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 NCK2O43639 380 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 XRCC6P12956 609 aaKnown RBP eCLIP15.66■□□□□ 0.1
SNHG4-203ENST00000506188 TFDP1Q14186 410 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 CTTNQ14247 550 aaKnown RBP15.66■□□□□ 0.1
SNHG4-203ENST00000506188 CSPP1Q1MSJ5 1256 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 MCTP1Q6DN14 999 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 FAM228AQ86W67 206 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 TMEM40Q8WWA1 233 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 RSPH1Q8WYR4 309 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 ZNF689Q96CS4 500 aaPredicted RBP15.66■□□□□ 0.1
SNHG4-203ENST00000506188 NLRP4Q96MN2 994 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 ASB2Q96Q27 587 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 LMAN2LQ9H0V9 348 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 TMX1Q9H3N1 280 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 ANKEF1Q9NU02 776 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 RGL1Q9NZL6 768 aa15.66■□□□□ 0.1
SNHG4-203ENST00000506188 LAMA2P24043 3122 aaKnown RBP15.65■□□□□ 0.1
SNHG4-203ENST00000506188 SLITRK3O94933 977 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 OR52Z1P0C646 297 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 MXD4Q14582 209 aaPredicted RBP15.65■□□□□ 0.1
SNHG4-203ENST00000506188 PAN2Q504Q3 1202 aaKnown RBP15.65■□□□□ 0.1
SNHG4-203ENST00000506188 TTC38Q5R3I4 469 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 PLA2G4FQ68DD2 849 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 CATSPER4Q7RTX7 472 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 CLP1Q92989 425 aaKnown RBP15.65■□□□□ 0.1
SNHG4-203ENST00000506188 MTMR9Q96QG7 549 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 SH2D3AQ9BRG2 576 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 SMC3Q9UQE7 1217 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 COL4A3BPQ9Y5P4 624 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 DOCK5Q9H7D0 1870 aa15.65■□□□□ 0.1
SNHG4-203ENST00000506188 A0A087WZ62 844 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 CARNS1A5YM72 827 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 TMEM150BA6NC51 233 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 TBKBP1A7MCY6 615 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 C9IYK1 514 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 C5orf67F2Z3F1 127 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 LPXNO60711 386 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 DGAT1O75907 488 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 STBD1O95210 358 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 LYPLA2O95372 231 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 EOMESO95936 686 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 NPEPPSP55786 919 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 FAM189BP81408 668 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 ST3GAL1Q11201 340 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 PCBP1Q15365 356 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNHG4-203ENST00000506188 ZNF174Q15697 407 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 HAUS3Q68CZ6 603 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 TWF2Q6IBS0 349 aaKnown RBP15.64■□□□□ 0.09
SNHG4-203ENST00000506188 RNF169Q8NCN4 708 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 PRPF31Q8WWY3 499 aaKnown RBP15.64■□□□□ 0.09
SNHG4-203ENST00000506188 LINC01599Q8WXQ3 324 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 P2RX5Q93086 422 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 TMX3Q96JJ7 454 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 ZNF668Q96K58 619 aaPredicted RBP15.64■□□□□ 0.09
SNHG4-203ENST00000506188 NACC1Q96RE7 527 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 MTRQ99707 1265 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 HSD17B14Q9BPX1 270 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 FDXACB1Q9BRP7 624 aaPredicted RBP15.64■□□□□ 0.09
SNHG4-203ENST00000506188 DHX33Q9H6R0 707 aaKnown RBP15.64■□□□□ 0.09
SNHG4-203ENST00000506188 TUFT1Q9NNX1 390 aa15.64■□□□□ 0.09
SNHG4-203ENST00000506188 LAD1O00515 517 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 SRGAP2CP0DJJ0 459 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 TECP42680 631 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 PHKA2P46019 1235 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 SPIRE1Q08AE8 756 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 EMC2Q15006 297 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 SPRED2Q7Z698 418 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 SRGAP1Q7Z6B7 1085 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 TBC1D32Q96NH3 1257 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 TMEM117Q9H0C3 514 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 PUF60Q9UHX1 559 aaKnown RBP15.63■□□□□ 0.09
SNHG4-203ENST00000506188 KAT6AQ92794 2004 aa15.63■□□□□ 0.09
SNHG4-203ENST00000506188 TET1Q8NFU7 2136 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 A0A0U1RQF3 1178 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 MGEA5O60502 916 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 ERLIN2O94905 339 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 U2AF2P26368 475 aaKnown RBP eCLIP15.62■□□□□ 0.091e-17■□□□□ 9.9
SNHG4-203ENST00000506188 RAB27AP51159 221 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 LAMTOR4Q0VGL1 99 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 DSC3Q14574 896 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 BMS1Q14692 1282 aaKnown RBP15.62■□□□□ 0.09
SNHG4-203ENST00000506188 RILPL1Q5EBL4 403 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 TMEM143Q96AN5 459 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 PGBD4Q96DM1 585 aa15.62■□□□□ 0.09
SNHG4-203ENST00000506188 MRPL9Q9BYD2 267 aaKnown RBP15.62■□□□□ 0.09
SNHG4-203ENST00000506188 NSUN3Q9H649 340 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms