RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 BMP8AQ7Z5Y6 402 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 LRRC43Q8N309 656 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 C12orf76Q8N812 135 aaPredicted RBP9.34□□□□□ -0.91
SNF8-204ENST00000506104 AUTS2Q8WXX7 1259 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 CASP10Q92851 521 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 CASD1Q96PB1 797 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 GLT8D2Q9H1C3 349 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 C6orf50Q9HD87 102 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 NRBP2Q9NSY0 501 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
SNF8-204ENST00000506104 BRPF3Q9ULD4 1205 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 CEP131Q9UPN4 1083 aa9.34□□□□□ -0.91
SNF8-204ENST00000506104 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.33□□□□□ -0.92
SNF8-204ENST00000506104 STK25O00506 426 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 FSCN2O14926 492 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 ZC3H11AO75152 810 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNF8-204ENST00000506104 ATG7O95352 703 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 SSBP05455 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
SNF8-204ENST00000506104 ASGR2P07307 311 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 ATP4AP20648 1035 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 RFX1P22670 979 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 PPM1AP35813 382 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 SREBF1P36956 1147 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 ALDH7A1P49419 539 aaKnown RBP9.33□□□□□ -0.92
SNF8-204ENST00000506104 RNASELQ05823 741 aaKnown RBP9.33□□□□□ -0.92
SNF8-204ENST00000506104 MTMR3Q13615 1198 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 MTERF2Q49AM1 385 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 KANK3Q6NY19 840 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 SYCE2Q6PIF2 218 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 LRRC55Q6ZSA7 311 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 ECHDC2Q86YB7 292 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 FLCNQ8NFG4 579 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 RASGRP4Q8TDF6 673 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 TMEM169Q96HH4 297 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 RIPOR3Q96MK2 946 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 SMOC2Q9H3U7 446 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 POMKQ9H5K3 350 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 NGRNQ9NPE2 291 aaKnown RBP9.33□□□□□ -0.92
SNF8-204ENST00000506104 BARHL2Q9NY43 387 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 LIMD1Q9UGP4 676 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 SEPT9Q9UHD8 586 aaPredicted RBP9.33□□□□□ -0.92
SNF8-204ENST00000506104 PCDHA10Q9Y5I2 948 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 GTF3C3Q9Y5Q9 886 aa9.33□□□□□ -0.92
SNF8-204ENST00000506104 ZDBF2Q9HCK1 2354 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 IGKV6D-21A0A0A0MT36 114 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 C2CD4DB7Z1M9 353 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 hCG_1984214I3L0E3 225 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 MAGEB2O15479 319 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 GPR32O75388 356 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 MYBP10242 640 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 CPA1P15085 419 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 HOXB8P17481 243 aaPredicted RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 SETQ01105 290 aaPredicted RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 TBC1D8BQ0IIM8 1120 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 NECTIN1Q15223 517 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 TWF2Q6IBS0 349 aaKnown RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 ZNF746Q6NUN9 644 aaPredicted RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 DHX32Q7L7V1 743 aaKnown RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 NIPA1Q7RTP0 329 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 SGMS1Q86VZ5 419 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 REXO1Q8N1G1 1221 aaKnown RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 ZNF713Q8N859 430 aaPredicted RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 TDRD5Q8NAT2 981 aaKnown RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 CCDC12Q8WUD4 166 aaPredicted RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 SUSD6Q92537 303 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 LPPQ93052 612 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 FAM167AQ96KS9 214 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 SH2D3AQ9BRG2 576 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 IRF2BPLQ9H1B7 796 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 S1PR5Q9H228 398 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 ELAC1Q9H777 363 aaKnown RBP9.32□□□□□ -0.92
SNF8-204ENST00000506104 TBC1D22BQ9NU19 505 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 LZTS1Q9Y250 596 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 HCFC2Q9Y5Z7 792 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 C5orf42Q9H799 3197 aa9.32□□□□□ -0.92
SNF8-204ENST00000506104 C2orf71A6NGG8 1288 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 WDR64B1ANS9 1081 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 ZBTB42B2RXF5 422 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 ADAMTS3O15072 1205 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 DHX15O43143 795 aaKnown RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 GAS7O60861 476 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 CLASP2O75122 1294 aaKnown RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 BRD1O95696 1058 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 OATP04181 439 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 EIF4BP23588 611 aaKnown RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 CDC27P30260 824 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 ADD1P35611 737 aaKnown RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 MTHFRP42898 656 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 BCAR1P56945 870 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 PLCB3Q01970 1234 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 PRKCEQ02156 737 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 DSC3Q14574 896 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 PFKFB3Q16875 520 aaPredicted RBP9.31□□□□□ -0.92
SNF8-204ENST00000506104 ADCK5Q3MIX3 580 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 CLLU1OSQ5K130 101 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 ATAT1Q5SQI0 421 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 TMC5Q6UXY8 1006 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 MIER3Q7Z3K6 550 aa9.31□□□□□ -0.92
SNF8-204ENST00000506104 SKAP1Q86WV1 359 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms