RNA–Protein interactions for RNA: ENST00000505883.1

MBD4-205, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 3

Gene MBD4, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-205ENST00000505883 KSR1Q8IVT5 923 aa18.34■□□□□ 0.53
MBD4-205ENST00000505883 EXOC8Q8IYI6 725 aa18.34■□□□□ 0.53
MBD4-205ENST00000505883 NLRP7Q8WX94 980 aa18.34■□□□□ 0.53
MBD4-205ENST00000505883 TMEM143Q96AN5 459 aa18.34■□□□□ 0.53
MBD4-205ENST00000505883 SCLT1Q96NL6 688 aa18.34■□□□□ 0.53
MBD4-205ENST00000505883 LRWD1Q9UFC0 647 aa18.34■□□□□ 0.53
MBD4-205ENST00000505883 CHD7Q9P2D1 2997 aa18.34■□□□□ 0.53
MBD4-205ENST00000505883 RPA1P27694 616 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 PRPHP41219 470 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 RARRES1P49788 294 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 ATP2C1P98194 919 aaPredicted RBP18.33■□□□□ 0.52
MBD4-205ENST00000505883 CDC42EP1Q00587 391 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 TAP1Q03518 808 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 EMC2Q15006 297 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 ODR4Q5SWX8 454 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 POTEGQ6S5H5 508 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 DTHD1Q6ZMT9 781 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 IGSF22Q8N9C0 903 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 MYLIPQ8WY64 445 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 TSPYL2Q9H2G4 693 aaPredicted RBP18.33■□□□□ 0.52
MBD4-205ENST00000505883 INSL6Q9Y581 213 aa18.33■□□□□ 0.52
MBD4-205ENST00000505883 A0A087WZ62 844 aa18.32■□□□□ 0.52
MBD4-205ENST00000505883 MGEA5O60502 916 aa18.32■□□□□ 0.52
MBD4-205ENST00000505883 CSDE1O75534 798 aaKnown RBP18.32■□□□□ 0.52
MBD4-205ENST00000505883 XRCC6P12956 609 aaKnown RBP eCLIP18.32■□□□□ 0.52
MBD4-205ENST00000505883 DARSP14868 501 aaKnown RBP18.32■□□□□ 0.52
MBD4-205ENST00000505883 CCT6AP40227 531 aaKnown RBP18.32■□□□□ 0.52
MBD4-205ENST00000505883 HTRA4P83105 476 aaPredicted RBP18.32■□□□□ 0.52
MBD4-205ENST00000505883 ECM1Q16610 540 aa18.32■□□□□ 0.52
MBD4-205ENST00000505883 PRPF31Q8WWY3 499 aaKnown RBP18.32■□□□□ 0.52
MBD4-205ENST00000505883 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
MBD4-205ENST00000505883 NACC1Q96RE7 527 aa18.32■□□□□ 0.52
MBD4-205ENST00000505883 FDXACB1Q9BRP7 624 aaPredicted RBP18.32■□□□□ 0.52
MBD4-205ENST00000505883 RAB34Q9BZG1 259 aa18.32■□□□□ 0.52
MBD4-205ENST00000505883 PRDM12Q9H4Q4 367 aa18.32■□□□□ 0.52
MBD4-205ENST00000505883 CERS4Q9HA82 394 aa18.32■□□□□ 0.52
MBD4-205ENST00000505883 PTPRSQ13332 1948 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 PP2D1A8MPX8 630 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 GAS2O43903 313 aaKnown RBP18.31■□□□□ 0.52
MBD4-205ENST00000505883 FGFR4P22455 802 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 RESTQ13127 1097 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 HAUS3Q68CZ6 603 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 SPRED2Q7Z698 418 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 PSPC1Q8WXF1 523 aaKnown RBP18.31■□□□□ 0.52
MBD4-205ENST00000505883 NLRP4Q96MN2 994 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 YME1L1Q96TA2 773 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 MTRQ99707 1265 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 ADAM2Q99965 735 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 GCOM2Q9BZD3 368 aaPredicted RBP18.31■□□□□ 0.52
MBD4-205ENST00000505883 XPNPEP1Q9NQW7 623 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 MTMR6Q9Y217 621 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 STXBP5LQ9Y2K9 1186 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 COL4A3BPQ9Y5P4 624 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 COL6A3P12111 3177 aa18.31■□□□□ 0.52
MBD4-205ENST00000505883 EVPLQ92817 2033 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 DENND3A2RUS2 1198 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 STX6O43752 255 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 DGAT1O75907 488 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 CDC25AP30304 524 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 LAMTOR4Q0VGL1 99 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 ZNF410Q86VK4 478 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 SNX29Q8TEQ0 813 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 TCP11Q8WWU5 503 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 ATP6V0A4Q9HBG4 840 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 RGS18Q9NS28 235 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 DBR1Q9UK59 544 aaKnown RBP18.3■□□□□ 0.52
MBD4-205ENST00000505883 STK24Q9Y6E0 443 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 MICAL3Q7RTP6 2002 aa18.3■□□□□ 0.52
MBD4-205ENST00000505883 GBF1Q92538 1859 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 LINC01553A4QN01 128 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 VWA3AA6NCI4 1184 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 USO1O60763 962 aaKnown RBP18.29■□□□□ 0.52
MBD4-205ENST00000505883 HSP90AA1P07900 732 aaKnown RBP18.29■□□□□ 0.52
MBD4-205ENST00000505883 SRGAP2CP0DJJ0 459 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 IBSPP21815 317 aaPredicted RBP18.29■□□□□ 0.52
MBD4-205ENST00000505883 MUTP22033 750 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 DSC3Q14574 896 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 SF3A1Q15459 793 aaKnown RBP18.29■□□□□ 0.52
MBD4-205ENST00000505883 KRT79Q5XKE5 535 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 ARL6IP4Q66PJ3 421 aaKnown RBP18.29■□□□□ 0.52
MBD4-205ENST00000505883 FAM173BQ6P4H8 233 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 FAM43BQ6ZT52 329 aaPredicted RBP18.29■□□□□ 0.52
MBD4-205ENST00000505883 CRIPAKQ8N1N5 446 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 SP7Q8TDD2 431 aaPredicted RBP18.29■□□□□ 0.52
MBD4-205ENST00000505883 ARNTL2Q8WYA1 636 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 IFT122Q9HBG6 1241 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 KIAA1024Q9UPX6 916 aa18.29■□□□□ 0.52
MBD4-205ENST00000505883 EPOPA6NHQ4 379 aa18.28■□□□□ 0.52
MBD4-205ENST00000505883 RFXAPO00287 272 aa18.28■□□□□ 0.52
MBD4-205ENST00000505883 FOSL2P15408 326 aa18.28■□□□□ 0.52
MBD4-205ENST00000505883 SARSP49591 514 aaKnown RBP18.28■□□□□ 0.52
MBD4-205ENST00000505883 SLC24A5Q71RS6 500 aa18.28■□□□□ 0.52
MBD4-205ENST00000505883 NPAS4Q8IUM7 802 aa18.28■□□□□ 0.52
MBD4-205ENST00000505883 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
MBD4-205ENST00000505883 MMTAG2Q9BU76 263 aaKnown RBP18.28■□□□□ 0.52
MBD4-205ENST00000505883 C1orf112Q9NSG2 853 aa18.28■□□□□ 0.52
MBD4-205ENST00000505883 DDX19AQ9NUU7 478 aaKnown RBP18.28■□□□□ 0.52
MBD4-205ENST00000505883 CLIC4Q9Y696 253 aa18.28■□□□□ 0.52
MBD4-205ENST00000505883 ARHGEF35A5YM69 484 aa18.27■□□□□ 0.52
MBD4-205ENST00000505883 C9IYK1 514 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms