RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 TSPYL2Q9H2G4 693 aaPredicted RBP12.75□□□□□ -0.37
KDM3B-203ENST00000505756 TMX1Q9H3N1 280 aa12.75□□□□□ -0.37
KDM3B-203ENST00000505756 DHX33Q9H6R0 707 aaKnown RBP12.75□□□□□ -0.37
KDM3B-203ENST00000505756 CHD7Q9P2D1 2997 aa12.75□□□□□ -0.37
KDM3B-203ENST00000505756 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
KDM3B-203ENST00000505756 PCDHB6Q9Y5E3 794 aa12.75□□□□□ -0.37
KDM3B-203ENST00000505756 EVPLQ92817 2033 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 LINC01553A4QN01 128 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 LAD1O00515 517 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 GAS2O43903 313 aaKnown RBP12.74□□□□□ -0.37
KDM3B-203ENST00000505756 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
KDM3B-203ENST00000505756 PTGDRQ13258 359 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 XKR9Q5GH70 373 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 RTN4RL1Q86UN2 441 aaPredicted RBP12.74□□□□□ -0.37
KDM3B-203ENST00000505756 ZNF410Q86VK4 478 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 FAM228AQ86W67 206 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 C4orf32Q8N8J7 132 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
KDM3B-203ENST00000505756 ERMNQ8TAM6 284 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 ARNTL2Q8WYA1 636 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 SCLT1Q96NL6 688 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
KDM3B-203ENST00000505756 CERS4Q9HA82 394 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 TUFT1Q9NNX1 390 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 RGS18Q9NS28 235 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 C1orf112Q9NSG2 853 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 ANKEF1Q9NU02 776 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
KDM3B-203ENST00000505756 SUCLA2Q9P2R7 463 aaPredicted RBP12.74□□□□□ -0.37
KDM3B-203ENST00000505756 ATP6V1DQ9Y5K8 247 aa12.74□□□□□ -0.37
KDM3B-203ENST00000505756 DENND3A2RUS2 1198 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 MGEA5O60502 916 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 STAG3L1P0CL83 205 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
KDM3B-203ENST00000505756 DARSP14868 501 aaKnown RBP12.73□□□□□ -0.37
KDM3B-203ENST00000505756 ERVK-21P61565 698 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 RESTQ13127 1097 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 ADGRE1Q14246 886 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 EMC2Q15006 297 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 HAUS3Q68CZ6 603 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 BRAPQ7Z569 592 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 CATSPER3Q86XQ3 398 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 RHPN2Q8IUC4 686 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 NPAS4Q8IUM7 802 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 CRIPAKQ8N1N5 446 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 MAFAQ8NHW3 353 aaPredicted RBP12.73□□□□□ -0.37
KDM3B-203ENST00000505756 TCP11Q8WWU5 503 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
KDM3B-203ENST00000505756 TGS1Q96RS0 853 aaKnown RBP12.73□□□□□ -0.37
KDM3B-203ENST00000505756 POLR3CQ9BUI4 534 aaPredicted RBP12.73□□□□□ -0.37
KDM3B-203ENST00000505756 GCOM2Q9BZD3 368 aaPredicted RBP12.73□□□□□ -0.37
KDM3B-203ENST00000505756 RAB34Q9BZG1 259 aa12.73□□□□□ -0.37
KDM3B-203ENST00000505756 RC3H2Q9HBD1 1191 aaKnown RBP12.73□□□□□ -0.37
KDM3B-203ENST00000505756 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.73□□□□□ -0.37
KDM3B-203ENST00000505756 LOXHD1Q8IVV2 1947 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 ADGRA3Q8IWK6 1321 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 A0A087WZ62 844 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 VPS37CA5D8V6 355 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-203ENST00000505756 ZBTB39O15060 712 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 DGAT1O75907 488 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 DGKIO75912 1065 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 SPATA31C1P0DKV0 1188 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 MUTP22033 750 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 RPA1P27694 616 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 PRPHP41219 470 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 SARSP49591 514 aaKnown RBP12.72□□□□□ -0.37
KDM3B-203ENST00000505756 RARRES1P49788 294 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 PDIA5Q14554 519 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 SLC24A5Q71RS6 500 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 SPRED2Q7Z698 418 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 PSPC1Q8WXF1 523 aaKnown RBP12.72□□□□□ -0.37
KDM3B-203ENST00000505756 ZNF689Q96CS4 500 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-203ENST00000505756 ZNF668Q96K58 619 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-203ENST00000505756 SAMD11Q96NU1 681 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 MTRQ99707 1265 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 ADAM2Q99965 735 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 FDXACB1Q9BRP7 624 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-203ENST00000505756 INO80BQ9C086 356 aaPredicted RBP12.72□□□□□ -0.37
KDM3B-203ENST00000505756 LRWD1Q9UFC0 647 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
KDM3B-203ENST00000505756 EPOPA6NHQ4 379 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 C9IYK1 514 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 ASAP2O43150 1006 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 MED24O75448 989 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.37
KDM3B-203ENST00000505756 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
KDM3B-203ENST00000505756 IGFBP4P22692 258 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 SFPQP23246 707 aaKnown RBP eCLIP12.71□□□□□ -0.37
KDM3B-203ENST00000505756 DSC3Q14574 896 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 ATL3Q6DD88 541 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 FIBCD1Q8N539 461 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 IGSF22Q8N9C0 903 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 PIGOQ8TEQ8 1089 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 PRPF31Q8WWY3 499 aaKnown RBP12.71□□□□□ -0.37
KDM3B-203ENST00000505756 TMEM143Q96AN5 459 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 NLRP4Q96MN2 994 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 NACC1Q96RE7 527 aa12.71□□□□□ -0.37
KDM3B-203ENST00000505756 ATP6V0A4Q9HBG4 840 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms