RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 GPATCH8Q9UKJ3 1502 aaKnown RBP7.01□□□□□ -1.29
DEPDC1B-203ENST00000505017 GOLGA6L22H0YM25 854 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 EFCAB14O75071 495 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 FZD7O75084 574 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 SDHAP31040 664 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 MRE11P49959 708 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 MECP2P51608 486 aaKnown RBP7□□□□□ -1.29
DEPDC1B-203ENST00000505017 FOXL1Q12952 345 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 TMEM177Q53S58 311 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 EP400NLQ6ZTU2 488 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 RTN4RL1Q86UN2 441 aaPredicted RBP7□□□□□ -1.29
DEPDC1B-203ENST00000505017 IGSF22Q8N9C0 903 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 SRPK1Q96SB4 655 aaKnown RBP7□□□□□ -1.29
DEPDC1B-203ENST00000505017 FBXO10Q9UK96 956 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 CDC42BPAQ5VT25 1732 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 DNMT1P26358 1616 aaKnown RBP7□□□□□ -1.29
DEPDC1B-203ENST00000505017 SETD5Q9C0A6 1442 aa7□□□□□ -1.29
DEPDC1B-203ENST00000505017 PREX2Q70Z35 1606 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 A0A0G2JNJ9 132 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 DVL2O14641 736 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 FOXP2O15409 715 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 GDF5P43026 501 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 STAT5BP51692 787 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 DGCR2P98153 550 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 FOXE3Q13461 319 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 MIIPQ5JXC2 388 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 USP30Q70CQ3 517 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 MKL1Q969V6 931 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 CLUHP3Q96NS8 147 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 OR14A2Q96R54 314 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 Q9UFV3 132 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 SFMBT1Q9UHJ3 866 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 HS3ST3A1Q9Y663 406 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 PTCH2Q9Y6C5 1203 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 ARAP3Q8WWN8 1544 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 HFM1A2PYH4 1435 aa6.99□□□□□ -1.29
DEPDC1B-203ENST00000505017 ROCK1Q13464 1354 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 CYR61O00622 381 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 SAFB2Q14151 953 aaKnown RBP eCLIP6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 ZNF568Q3ZCX4 644 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 USP39Q53GS9 565 aaKnown RBP6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 C2orf27AQ580R0 203 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 KRTAP5-3Q6L8H2 238 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 OTOP1Q7RTM1 612 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 OTOP2Q7RTS6 562 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 ZNF808Q8N4W9 903 aaPredicted RBP6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 OR14K1Q8NGZ2 314 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 THAP3Q8WTV1 239 aaPredicted RBP6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 MRPL4Q9BYD3 311 aaKnown RBP6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 OR10A2Q9H208 303 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 NCOA5Q9HCD5 579 aaKnown RBP6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 PODXL2Q9NZ53 605 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 CFDP1Q9UEE9 299 aaPredicted RBP6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 ASB1Q9Y576 335 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 MYO5CQ9NQX4 1742 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 CAMSAP2Q08AD1 1489 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 PLEKHH2Q8IVE3 1493 aa6.98□□□□□ -1.29
DEPDC1B-203ENST00000505017 GCC2Q8IWJ2 1684 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 NPIPB8E9PQR5 432 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 ARHGEF5Q12774 1597 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 TMEM132BQ14DG7 1078 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 ACAP1Q15027 740 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 HS1BP3Q53T59 392 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 POLNQ7Z5Q5 900 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 IL17DQ8TAD2 202 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 MRIQ9BWK5 157 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 C12orf65Q9H3J6 166 aaKnown RBP6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 KANSL2Q9H9L4 492 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 SHANK2Q9UPX8 1470 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 WDR7Q9Y4E6 1490 aa6.97□□□□□ -1.29
DEPDC1B-203ENST00000505017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.96□□□□□ -1.29
DEPDC1B-203ENST00000505017 RAB3GAP2Q9H2M9 1393 aa6.96□□□□□ -1.29
DEPDC1B-203ENST00000505017 CDC42BPBQ9Y5S2 1711 aa6.96□□□□□ -1.29
DEPDC1B-203ENST00000505017 DAPK1P53355 1430 aa6.96□□□□□ -1.3
DEPDC1B-203ENST00000505017 SLC12A8A0AV02 714 aa6.96□□□□□ -1.3
DEPDC1B-203ENST00000505017 RAPGEF3O95398 923 aa6.96□□□□□ -1.3
DEPDC1B-203ENST00000505017 IRF9Q00978 393 aa6.96□□□□□ -1.3
DEPDC1B-203ENST00000505017 GRAMD4Q6IC98 578 aa6.96□□□□□ -1.3
DEPDC1B-203ENST00000505017 HIPK4Q8NE63 616 aa6.96□□□□□ -1.3
DEPDC1B-203ENST00000505017 ZSWIM2Q8NEG5 633 aa6.96□□□□□ -1.3
DEPDC1B-203ENST00000505017 CROCC2H7BZ55 1655 aa6.96□□□□□ -1.3
DEPDC1B-203ENST00000505017 ADGBQ8N7X0 1667 aa6.96□□□□□ -1.3
DEPDC1B-203ENST00000505017 MAFO75444 373 aaPredicted RBP6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 C1SP09871 688 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 MSX2P35548 267 aaPredicted RBP6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 STAT3P40763 770 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 HMGA2P52926 109 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 ANTXR2P58335 489 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 NRN1LQ496H8 165 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 SPTY2D1Q68D10 685 aaPredicted RBP6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 PMFBP1Q8TBY8 1022 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 PLA2G3Q9NZ20 509 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 PUF60Q9UHX1 559 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 MAGEL2Q9UJ55 1249 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 CTDP1Q9Y5B0 961 aaPredicted RBP6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 ADGRL2O95490 1459 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 TTC37Q6PGP7 1564 aa6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 DHX57Q6P158 1386 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-203ENST00000505017 ABCA9Q8IUA7 1624 aa6.94□□□□□ -1.3
DEPDC1B-203ENST00000505017 ABCC5O15440 1437 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms