RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 TOP1MTQ969P6 601 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 SCLT1Q96NL6 688 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 PPP1R16BQ96T49 567 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 RAD9AQ99638 391 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 GCOM2Q9BZD3 368 aaPredicted RBP23.03■■□□□ 1.28
DDR1-255ENST00000504927 ATP6V0A4Q9HBG4 840 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 ERVK-5Q9HDB9 667 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 EVPLQ92817 2033 aa23.03■■□□□ 1.28
DDR1-255ENST00000504927 EYSQ5T1H1 3165 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 GJB5O95377 273 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 DARSP14868 501 aaKnown RBP23.02■■□□□ 1.28
DDR1-255ENST00000504927 RABGGTBP53611 331 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 MXD4Q14582 209 aaPredicted RBP23.02■■□□□ 1.28
DDR1-255ENST00000504927 POTEGQ6S5H5 508 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 MYOCDQ8IZQ8 938 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 PRPF31Q8WWY3 499 aaKnown RBP23.02■■□□□ 1.28
DDR1-255ENST00000504927 TMEM143Q96AN5 459 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 FAM161BQ96MY7 647 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 TTYH1Q9H313 450 aaPredicted RBP23.02■■□□□ 1.28
DDR1-255ENST00000504927 SEMA6BQ9H3T3 888 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 SLC28A3Q9HAS3 691 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 KIAA1024Q9UPX6 916 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 DNM3Q9UQ16 869 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 COL4A3BPQ9Y5P4 624 aa23.02■■□□□ 1.28
DDR1-255ENST00000504927 SLC26A4O43511 780 aa23.01■■□□□ 1.27
DDR1-255ENST00000504927 TLL1O43897 1013 aa23.01■■□□□ 1.27
DDR1-255ENST00000504927 SPRYD3Q8NCJ5 442 aa23.01■■□□□ 1.27
DDR1-255ENST00000504927 TSPYL2Q9H2G4 693 aaPredicted RBP23.01■■□□□ 1.27
DDR1-255ENST00000504927 RNF216Q9NWF9 866 aaPredicted RBP23.01■■□□□ 1.27
DDR1-255ENST00000504927 MTMR10Q9NXD2 777 aa23.01■■□□□ 1.27
DDR1-255ENST00000504927 INSL6Q9Y581 213 aa23.01■■□□□ 1.27
DDR1-255ENST00000504927 CLIC4Q9Y696 253 aa23.01■■□□□ 1.27
DDR1-255ENST00000504927 PTPRSQ13332 1948 aa23■■□□□ 1.27
DDR1-255ENST00000504927 A0A087WWV3 80 aa23■■□□□ 1.27
DDR1-255ENST00000504927 ARHGEF35A5YM69 484 aa23■■□□□ 1.27
DDR1-255ENST00000504927 LONP1P36776 959 aaKnown RBP23■■□□□ 1.27
DDR1-255ENST00000504927 ECM1Q16610 540 aa23■■□□□ 1.27
DDR1-255ENST00000504927 FAM228AQ86W67 206 aa23■■□□□ 1.27
DDR1-255ENST00000504927 MCPH1Q8NEM0 835 aa23■■□□□ 1.27
DDR1-255ENST00000504927 NT5C3AQ9H0P0 336 aa23■■□□□ 1.27
DDR1-255ENST00000504927 TMX1Q9H3N1 280 aa23■■□□□ 1.27
DDR1-255ENST00000504927 ZNF576Q9H609 170 aa23■■□□□ 1.27
DDR1-255ENST00000504927 DDX19AQ9NUU7 478 aaKnown RBP23■■□□□ 1.27
DDR1-255ENST00000504927 YBX2Q9Y2T7 364 aaKnown RBP23■■□□□ 1.27
DDR1-255ENST00000504927 SIP14410 1827 aa23■■□□□ 1.27
DDR1-255ENST00000504927 A0A087WZ62 844 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 ZSCAN22P10073 491 aaPredicted RBP22.99■■□□□ 1.27
DDR1-255ENST00000504927 CDC25AP30304 524 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 POU5F1BQ06416 359 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 LAMTOR4Q0VGL1 99 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 PTPAQ15257 358 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 HYIQ5T013 277 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 FAM173BQ6P4H8 233 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 PADI6Q6TGC4 694 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 RTN4RL1Q86UN2 441 aaPredicted RBP22.99■■□□□ 1.27
DDR1-255ENST00000504927 ZNF396Q96N95 335 aaPredicted RBP22.99■■□□□ 1.27
DDR1-255ENST00000504927 GUCD1Q96NT3 240 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 FDXACB1Q9BRP7 624 aaPredicted RBP22.99■■□□□ 1.27
DDR1-255ENST00000504927 MMTAG2Q9BU76 263 aaKnown RBP22.99■■□□□ 1.27
DDR1-255ENST00000504927 XPNPEP1Q9NQW7 623 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 C1orf112Q9NSG2 853 aa22.99■■□□□ 1.27
DDR1-255ENST00000504927 MORC2Q9Y6X9 1032 aaPredicted RBP22.99■■□□□ 1.27
DDR1-255ENST00000504927 DENND3A2RUS2 1198 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 PP2D1A8MPX8 630 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 ZSCAN20P17040 1043 aaPredicted RBP22.98■■□□□ 1.27
DDR1-255ENST00000504927 SFPQP23246 707 aaKnown RBP eCLIP22.98■■□□□ 1.27
DDR1-255ENST00000504927 ARL2P36404 184 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 TFDP1Q14186 410 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 SRGAP1Q7Z6B7 1085 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 KSR1Q8IVT5 923 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 ZNF668Q96K58 619 aaPredicted RBP22.98■■□□□ 1.27
DDR1-255ENST00000504927 NLRP4Q96MN2 994 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 NKX2-4Q9H2Z4 354 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 IFT122Q9HBG6 1241 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 RGS18Q9NS28 235 aa22.98■■□□□ 1.27
DDR1-255ENST00000504927 USO1O60763 962 aaKnown RBP22.97■■□□□ 1.27
DDR1-255ENST00000504927 EYA4O95677 639 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 SRGAP2CP0DJJ0 459 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 MYOGP15173 224 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 CYP11B2P19099 503 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 UBA7P41226 1012 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 HTRA4P83105 476 aaPredicted RBP22.97■■□□□ 1.27
DDR1-255ENST00000504927 SLC24A5Q71RS6 500 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 TMCO2Q7Z6W1 182 aaPredicted RBP22.97■■□□□ 1.27
DDR1-255ENST00000504927 CDK5RAP3Q96JB5 506 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 ADAM2Q99965 735 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 BHMT2Q9H2M3 363 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 CHST12Q9NRB3 414 aa22.97■■□□□ 1.27
DDR1-255ENST00000504927 BMP2KQ9NSY1 1161 aaPredicted RBP22.97■■□□□ 1.27
DDR1-255ENST00000504927 SRPRBQ9Y5M8 271 aaKnown RBP22.97■■□□□ 1.27
DDR1-255ENST00000504927 UPP2O95045 317 aa22.96■■□□□ 1.27
DDR1-255ENST00000504927 CA3P07451 260 aa22.96■■□□□ 1.27
DDR1-255ENST00000504927 STAG3L1P0CL83 205 aa22.96■■□□□ 1.27
DDR1-255ENST00000504927 SLC39A14Q15043 492 aa22.96■■□□□ 1.27
DDR1-255ENST00000504927 PCBP1Q15365 356 aaKnown RBP eCLIP22.96■■□□□ 1.27
DDR1-255ENST00000504927 PPP2R2DQ66LE6 453 aa22.96■■□□□ 1.27
DDR1-255ENST00000504927 FAM117BQ6P1L5 589 aa22.96■■□□□ 1.27
DDR1-255ENST00000504927 CABP7Q86V35 215 aa22.96■■□□□ 1.27
DDR1-255ENST00000504927 RNF149Q8NC42 400 aa22.96■■□□□ 1.27
DDR1-255ENST00000504927 CALML4Q96GE6 196 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms