RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 NAPAP54920 295 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 ITIH3Q06033 890 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 CEP55Q53EZ4 464 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 CWF19L1Q69YN2 538 aaKnown RBP7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 SWSAP1Q6NVH7 229 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 MIS18BP1Q6P0N0 1132 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 SLC39A11Q8N1S5 342 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 MRPL43Q8N983 215 aaKnown RBP7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 FEZF2Q8TBJ5 459 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 HELQQ8TDG4 1101 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 KCNG4Q8TDN1 519 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 AUTS2Q8WXX7 1259 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 CASD1Q96PB1 797 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 MAP3K14Q99558 947 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 LRRC2Q9BYS8 371 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 ELAC1Q9H777 363 aaKnown RBP7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 RNF19AQ9NV58 838 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 TCEAL9Q9UHQ7 104 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 FBXL21Q9UKT6 434 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 AKT3Q9Y243 479 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 C5orf42Q9H799 3197 aa7.84□□□□□ -1.15
NPIPB3-203ENST00000504841 COL1A2P08123 1366 aa7.84□□□□□ -1.16
NPIPB3-203ENST00000504841 WDFY4Q6ZS81 3184 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 ZBTB42B2RXF5 422 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 STK25O00506 426 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 PI15O43692 258 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 C22orf31O95567 290 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 CXCL14O95715 111 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 EPCAMP16422 314 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 ZSCAN20P17040 1043 aaPredicted RBP7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 FGFR4P22455 802 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 RFX1P22670 979 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 CHMLP26374 656 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 ADCY7P51828 1080 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 DSC3Q14574 896 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 BMS1Q14692 1282 aaKnown RBP7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 LONRF3Q496Y0 759 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 ZNF484Q5JVG2 852 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 CLLU1OSQ5K130 101 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 ATAT1Q5SQI0 421 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 TTC22Q5TAA0 569 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 WWC2Q6AWC2 1192 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 KIAA1841Q6NSI8 718 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 TYW1BQ6NUM6 668 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 TMC5Q6UXY8 1006 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 TMTC3Q6ZXV5 915 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 ERMP1Q7Z2K6 904 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 TMEM173Q86WV6 379 aaPredicted RBP7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 PLA2G4DQ86XP0 818 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 ECHDC2Q86YB7 292 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 LRRC71Q8N4P6 559 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 TMEM169Q96HH4 297 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 MAP7D2Q96T17 732 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 RBM8AQ9Y5S9 174 aaKnown RBP7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 SLC12A7Q9Y666 1083 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 EVPLQ92817 2033 aa7.83□□□□□ -1.16
NPIPB3-203ENST00000504841 ZFHX2Q9C0A1 2572 aaPredicted RBP7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 MYO10Q9HD67 2058 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 IGKV6D-21A0A0A0MT36 114 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 ZC3H11AO75152 810 aaKnown RBP eCLIP7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 GPR32O75388 356 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 ATG7O95352 703 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 SEC24BO95487 1268 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 EOMESO95936 686 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 CALM1P0DP23 149 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 CALM2P0DP24 149 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 CALM3P0DP25 149 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 ATP4AP20648 1035 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 MCM5P33992 734 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 SREBF1P36956 1147 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 ALDH7A1P49419 539 aaKnown RBP7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 CLCN5P51795 746 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 BCAR1P56945 870 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 NLRP11P59045 1033 aaKnown RBP7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 FAM189BP81408 668 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 COL9A3Q14050 684 aaPredicted RBP7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 ANGPT1Q15389 498 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 JAKMIP3Q5VZ66 844 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 EFCAB12Q6NXP0 572 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 ABHD15Q6UXT9 468 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 CCDC149Q6ZUS6 474 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 CABP7Q86V35 215 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 ZDHHC14Q8IZN3 488 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 SIX5Q8N196 739 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 VPS52Q8N1B4 723 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 TMEM87BQ96K49 555 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 HINFPQ9BQA5 517 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 DZANK1Q9NVP4 752 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 GABBR1Q9UBS5 961 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 INPP5FQ9Y2H2 1132 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 SAMM50Q9Y512 469 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 STK24Q9Y6E0 443 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 FAM186AA6NE01 2351 aa7.82□□□□□ -1.16
NPIPB3-203ENST00000504841 CNTNAP5Q8WYK1 1306 aa7.81□□□□□ -1.16
NPIPB3-203ENST00000504841 MED19A0JLT2 244 aaPredicted RBP7.81□□□□□ -1.16
NPIPB3-203ENST00000504841 FAM86B1E9PN63 330 aa7.81□□□□□ -1.16
NPIPB3-203ENST00000504841 MEIS1O00470 390 aa7.81□□□□□ -1.16
NPIPB3-203ENST00000504841 SGSM2O43147 1006 aa7.81□□□□□ -1.16
NPIPB3-203ENST00000504841 CSDE1O75534 798 aaKnown RBP7.81□□□□□ -1.16
NPIPB3-203ENST00000504841 SSBP05455 408 aaKnown RBP eCLIP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms