RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 PIGOQ8TEQ8 1089 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 FGD4Q96M96 766 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 TMEM109Q9BVC6 243 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 ABCF2Q9UG63 623 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 ADAMTS1Q9UHI8 967 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 BZW2Q9Y6E2 419 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 ITGA4P13612 1032 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 PSMC4P43686 418 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 NUP98P52948 1817 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 PMS2P54278 862 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 CCDC15Q0P6D6 951 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 NONOQ15233 471 aaKnown RBP eCLIP19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 DENND2CQ68D51 928 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 METTL13Q8N6R0 699 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 DNAJC9Q8WXX5 260 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 LARP4BQ92615 738 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 STMN4Q9H169 189 aaPredicted RBP19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 GANQ9H2C0 597 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 DPH5Q9H2P9 285 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 FGFR1OP2Q9NVK5 253 aa19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 SUCLA2Q9P2R7 463 aaPredicted RBP19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 G3BP2Q9UN86 482 aaKnown RBP19.29■□□□□ 0.68
POLR2J3-209ENST00000504157 A0A0A6YYK5 440 aaPredicted RBP19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 CREB3O43889 395 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 TRIM59Q8IWR1 403 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 UBE2OQ9C0C9 1292 aaKnown RBP19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 ZDHHC18Q9NUE0 388 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 ARPP21Q9UBL0 812 aaPredicted RBP19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 MAD2L2Q9UI95 211 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 CNOT7Q9UIV1 285 aaKnown RBP19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 USP21Q9UK80 565 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 STXBP5LQ9Y2K9 1186 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 TLDC2A0PJX2 215 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 CCNT1O60563 726 aaKnown RBP19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 IL2RBP14784 551 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 RAPGEF1Q13905 1077 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 CCDC152Q4G0S7 254 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 C1QTNF12Q5T7M4 302 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 RNF25Q96BH1 459 aaPredicted RBP19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 NLRP3Q96P20 1036 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 ZWILCHQ9H900 591 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 DMAP1Q9NPF5 467 aaPredicted RBP19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 ATP8A2Q9NTI2 1148 aa19.28■□□□□ 0.68
POLR2J3-209ENST00000504157 BAZ2BQ9UIF8 2168 aaKnown RBP19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 TSPY2A6NKD2 308 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 IGHMBP2P38935 993 aaKnown RBP19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 TECP42680 631 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 FXR2P51116 673 aaKnown RBP eCLIP19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 MTA1Q13330 715 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 PPP2R5EQ16537 467 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 FOXB2Q5VYV0 432 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 BTNL9Q6UXG8 535 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 HEATR3Q7Z4Q2 680 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 NEK8Q86SG6 692 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 MYOCDQ8IZQ8 938 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 PNMA1Q8ND90 353 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 TPCN2Q8NHX9 752 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 SH3TC2Q8TF17 1288 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 PNMA5Q96PV4 448 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 LZTS2Q9BRK4 669 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 DCP1AQ9NPI6 582 aaPredicted RBP19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 NENFQ9UMX5 172 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 PHF24Q9UPV7 400 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 PCDHGA4Q9Y5G9 962 aa19.27■□□□□ 0.68
POLR2J3-209ENST00000504157 NRAPQ86VF7 1730 aa19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 KIAA1551Q9HCM1 1747 aa19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 TCP11X1B4DZS4 312 aa19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 NPEPPSP55786 919 aa19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 SLC35G1Q2M3R5 365 aa19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 PABPC1LQ4VXU2 614 aaKnown RBP19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 RNF43Q68DV7 783 aa19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 RBBP8NLQ8NC74 664 aaPredicted RBP19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 CELF4Q9BZC1 486 aaKnown RBP19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 LRMDAQ9H2I8 198 aa19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 ETNK1Q9HBU6 452 aa19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 CTTNBP2NLQ9P2B4 639 aa19.27■□□□□ 0.67
POLR2J3-209ENST00000504157 RXRBP28702 533 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 PTDSS1P48651 473 aaKnown RBP19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 LETM2Q2VYF4 491 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 TAOK1Q7L7X3 1001 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 ZC3H3Q8IXZ2 948 aaKnown RBP19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 SYCE1Q8N0S2 351 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 AGGF1Q8N302 714 aaeCLIP19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 FAM133AQ8N9E0 248 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 SLC17A8Q8NDX2 589 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 PHC3Q8NDX5 983 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 ZNF384Q8TF68 577 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 RAD54LQ92698 747 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 TXLNGQ9NUQ3 528 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 SCOCQ9UIL1 159 aa19.26■□□□□ 0.67
POLR2J3-209ENST00000504157 ATP5HO75947 161 aa19.25■□□□□ 0.67
POLR2J3-209ENST00000504157 CYP19A1P11511 503 aaPredicted RBP19.25■□□□□ 0.67
POLR2J3-209ENST00000504157 CHRNDQ07001 517 aa19.25■□□□□ 0.67
POLR2J3-209ENST00000504157 DUPD1Q68J44 220 aa19.25■□□□□ 0.67
POLR2J3-209ENST00000504157 CFAP61Q8NHU2 1237 aa19.25■□□□□ 0.67
POLR2J3-209ENST00000504157 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
POLR2J3-209ENST00000504157 FAM192AQ9GZU8 254 aa19.25■□□□□ 0.67
POLR2J3-209ENST00000504157 INTUQ9ULD6 942 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms