RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 GNAQP50148 359 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 POLGP54098 1239 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 TBC1D8BQ0IIM8 1120 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 NONOQ15233 471 aaKnown RBP eCLIP18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 PDXDC2PQ6P474 469 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 METTL13Q8N6R0 699 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 HELQQ8TDG4 1101 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 AUTS2Q8WXX7 1259 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 ZNF302Q9NR11 478 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 DNAH14Q0VDD8 3507 aa18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 KMT2BQ9UMN6 2715 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-210ENST00000503827 CARNS1A5YM72 827 aa18■□□□□ 0.47
PDLIM7-210ENST00000503827 NARSO43776 548 aaKnown RBP18■□□□□ 0.47
PDLIM7-210ENST00000503827 C22orf31O95567 290 aa18■□□□□ 0.47
PDLIM7-210ENST00000503827 ITGB3BPQ13352 177 aaPredicted RBP18■□□□□ 0.47
PDLIM7-210ENST00000503827 RSPO4Q2I0M5 234 aaPredicted RBP18■□□□□ 0.47
PDLIM7-210ENST00000503827 ABHD15Q6UXT9 468 aa18■□□□□ 0.47
PDLIM7-210ENST00000503827 DCLK2Q8N568 766 aa18■□□□□ 0.47
PDLIM7-210ENST00000503827 OSBPL3Q9H4L5 887 aa18■□□□□ 0.47
PDLIM7-210ENST00000503827 AGO4Q9HCK5 861 aaKnown RBP18■□□□□ 0.47
PDLIM7-210ENST00000503827 NCOR2Q9Y618 2525 aa18■□□□□ 0.47
PDLIM7-210ENST00000503827 KRBA1A5PL33 1030 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 ZBTB42B2RXF5 422 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 DDX39AO00148 427 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 DDAH1O94760 285 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 CYP21A2P08686 494 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 SP9P0CG40 484 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 LETM2Q2VYF4 491 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 DDX53Q86TM3 631 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 CCDC60Q8IWA6 550 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 PLEKHM2Q8IWE5 1019 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 CKAP2LQ8IYA6 745 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 ZNF654Q8IZM8 581 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 FEZF2Q8TBJ5 459 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 MYL10Q9BUA6 226 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 OTOGLQ3ZCN5 2332 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 CEP250Q9BV73 2442 aa17.99■□□□□ 0.47
PDLIM7-210ENST00000503827 A0A0U1RQF3 1178 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 ZC3H11AO75152 810 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 SDHBP21912 280 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 EIF4BP23588 611 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 NLRP11P59045 1033 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 CEP55Q53EZ4 464 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 SPECC1Q5M775 1068 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 MIS18BP1Q6P0N0 1132 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 C15orf39Q6ZRI6 1047 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 ZNF710Q8N1W2 664 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 SRBD1Q8N5C6 995 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 IGDCC4Q8TDY8 1250 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 BBXQ8WY36 941 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 TBC1D17Q9HA65 648 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 CA14Q9ULX7 337 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 AKT3Q9Y243 479 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 EPG5Q9HCE0 2579 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 WDR81Q562E7 1941 aa17.98■□□□□ 0.47
PDLIM7-210ENST00000503827 E7EWF7 191 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 PLEKHA8P1O95397 391 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 CCNE2O96020 404 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 SWSAP1Q6NVH7 229 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 ZNF598Q86UK7 904 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 RSPH1Q8WYR4 309 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 IGSF21Q96ID5 467 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 MAP7D2Q96T17 732 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 EMILIN2Q9BXX0 1053 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 CEP131Q9UPN4 1083 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 SIT1Q9Y3P8 196 aa17.97■□□□□ 0.47
PDLIM7-210ENST00000503827 MIA3Q5JRA6 1907 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 MAGEB2O15479 319 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 DCNP07585 359 aaKnown RBP17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 SRFP11831 508 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 ATP4AP20648 1035 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 KLRC2P26717 231 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 TMOD1P28289 359 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 GBP2P32456 591 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 CLCN3P51790 818 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 PHLDB3Q6NSJ2 640 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 TMEM173Q86WV6 379 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 C1orf210Q8IVY1 113 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 CMTR1Q8N1G2 835 aaKnown RBP17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 RSAD2Q8WXG1 361 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 IL25Q9H293 177 aa17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 TPRP12270 2363 aaKnown RBP17.96■□□□□ 0.47
PDLIM7-210ENST00000503827 hCG_1642624A0A1W2PR95 340 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 MEIS1O00470 390 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 KINO60870 393 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 ZNF76P36508 570 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 CLCN4P51793 760 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 ANTXR2P58335 489 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 PTPN14Q15678 1187 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 EFCAB12Q6NXP0 572 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 TRMT1LQ7Z2T5 733 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 SLC44A3Q8N4M1 653 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 STAMQ92783 540 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 NXPE3Q969Y0 559 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 KLHL5Q96PQ7 755 aa17.95■□□□□ 0.46
PDLIM7-210ENST00000503827 ADAMTS10Q9H324 1103 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms