RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 CCDC60Q8IWA6 550 aaPredicted RBP23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 SYCP3Q8IZU3 236 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 OPTNQ96CV9 577 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 ACCSQ96QU6 501 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 RCCD1A6NED2 376 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 SOWAHBA6NEL2 793 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 SLC9A1P19634 815 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 KIF11P52732 1056 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 SFMBT2Q5VUG0 894 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 TCERG1LQ5VWI1 586 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 HAUS6Q7Z4H7 955 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 C12orf56Q8IXR9 622 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 FAM133AQ8N9E0 248 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 SLC17A8Q8NDX2 589 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 CGNQ9P2M7 1197 aaKnown RBP23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 POTEB2H3BUK9 544 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 ATG7O95352 703 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 VAV2P52735 878 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 PEX3P56589 373 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 LDLRAD1Q5T700 205 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 GBP6Q6ZN66 633 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 TRMT1LQ7Z2T5 733 aaKnown RBP23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 ARMC9Q7Z3E5 817 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 KIAA1328Q86T90 577 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 JAKMIP2Q96AA8 810 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 PAGR1Q9BTK6 254 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 LACRTQ9GZZ8 138 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 PDLIM7Q9NR12 457 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 GUCA1BQ9UMX6 200 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 TFR2Q9UP52 801 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 FRMD4BQ9Y2L6 1034 aa23.37■■□□□ 1.33
UBE2D3-216ENST00000503742 IGSF9BQ9UPX0 1349 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 SUPT20HL2P0C7V6 817 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 CYP2J2P51589 502 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 CYP27A1Q02318 531 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 CCDC122Q5T0U0 273 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 FAM102BQ5T8I3 360 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 KLHDC7AQ5VTJ3 777 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 MIS18BP1Q6P0N0 1132 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 AIPL1Q9NZN9 384 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 FBXL5Q9UKA1 691 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 LRRC37A2A6NM11 1700 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 SLC25A27O95847 323 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 ACTN1P12814 892 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 SNRPFP62306 86 aaKnown RBP23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 PPP2R5AQ15172 486 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 SPA17Q15506 151 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 GPAT2Q6NUI2 795 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 FASTKD5Q7L8L6 764 aaKnown RBP23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 CEP170P1Q96L14 293 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 R3HDMLQ9H3Y0 253 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 TXNRD2Q9NNW7 524 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 RBPJLQ9UBG7 517 aa23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 MYH9P35579 1960 aaKnown RBP23.36■■□□□ 1.33
UBE2D3-216ENST00000503742 CTAGE9A4FU28 777 aa23.35■■□□□ 1.33
UBE2D3-216ENST00000503742 KRT86O43790 486 aa23.35■■□□□ 1.33
UBE2D3-216ENST00000503742 SERPING1P05155 500 aa23.35■■□□□ 1.33
UBE2D3-216ENST00000503742 UCHL3P15374 230 aa23.35■■□□□ 1.33
UBE2D3-216ENST00000503742 EAPPQ56P03 285 aaPredicted RBP23.35■■□□□ 1.33
UBE2D3-216ENST00000503742 CARD6Q9BX69 1037 aa23.35■■□□□ 1.33
UBE2D3-216ENST00000503742 SIX2Q9NPC8 291 aa23.35■■□□□ 1.33
UBE2D3-216ENST00000503742 SYNGAP1Q96PV0 1343 aa23.35■■□□□ 1.33
UBE2D3-216ENST00000503742 SLC16A4O15374 487 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 PRKCEQ02156 737 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 SP4Q02446 784 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 SLC9C1Q4G0N8 1177 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 SEPT14Q6ZU15 432 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 CYFIP1Q7L576 1253 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 TMEM161BQ8NDZ6 487 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 KIFAP3Q92845 792 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 DEF6Q9H4E7 631 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 C17orf75Q9HAS0 396 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 PCDHA13Q9Y5I0 950 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 V9GYY5 206 aaPredicted RBP23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 IQCA1LA6NCM1 817 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 AKR1B10O60218 316 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 EXOC3O60645 756 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 COPB2P35606 906 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 GJA5P36382 358 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 SPIRE2Q8WWL2 714 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 NAPGQ99747 312 aaPredicted RBP23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 NTPCRQ9BSD7 190 aaKnown RBP23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 MYO6Q9UM54 1294 aa23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 MAFBQ9Y5Q3 323 aaPredicted RBP23.34■■□□□ 1.33
UBE2D3-216ENST00000503742 RBAK-RBAKDNI3L0D1 243 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 DGAT1O75907 488 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 NPTX2P47972 431 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 FMO5P49326 533 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 TUBB2AQ13885 445 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 XKR3Q5GH77 459 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 HVCN1Q96D96 273 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 TUBB2BQ9BVA1 445 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 TSGA10Q9BZW7 698 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 CYP26B1Q9NR63 512 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 GCNT4Q9P109 453 aa23.33■■□□□ 1.33
UBE2D3-216ENST00000503742 TISP43B9A030 160 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 SORBS3O60504 671 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 TADA3O75528 432 aa23.32■■□□□ 1.32
UBE2D3-216ENST00000503742 OSBPP22059 807 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms