RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 PLXNA4Q9HCM2 1894 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 FAM205CA6NFA0 338 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 STBD1O95210 358 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 SEC24BO95487 1268 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 ITGB1P05556 798 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 FGFR1P11362 822 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 ZSCAN20P17040 1043 aaPredicted RBP21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 FGFR4P22455 802 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 PSMC5P62195 406 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 PPP2R5CQ13362 524 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 DRP2Q13474 957 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 DSC3Q14574 896 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 NAALADL2Q58DX5 795 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 POTEDQ86YR6 584 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 TMEM161AQ9NX61 479 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 VAV3Q9UKW4 847 aa21.83■■□□□ 1.09
UBE2D3-215ENST00000503418 DARSP14868 501 aaKnown RBP21.82■■□□□ 1.08
UBE2D3-215ENST00000503418 DNM2P50570 870 aa21.82■■□□□ 1.08
UBE2D3-215ENST00000503418 PLA2G4FQ68DD2 849 aa21.82■■□□□ 1.08
UBE2D3-215ENST00000503418 PTCRAQ6ISU1 281 aaPredicted RBP21.82■■□□□ 1.08
UBE2D3-215ENST00000503418 NSUN7Q8NE18 718 aaKnown RBP21.82■■□□□ 1.08
UBE2D3-215ENST00000503418 NEK9Q8TD19 979 aa21.82■■□□□ 1.08
UBE2D3-215ENST00000503418 CEP89Q96ST8 783 aa21.82■■□□□ 1.08
UBE2D3-215ENST00000503418 IGFLR1Q9H665 355 aa21.82■■□□□ 1.08
UBE2D3-215ENST00000503418 ELAC1Q9H777 363 aaKnown RBP21.82■■□□□ 1.08
UBE2D3-215ENST00000503418 JAK2O60674 1132 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 CSDE1O75534 798 aaKnown RBP21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 IL9P15248 144 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 DNAJB1P25685 340 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 QARSP47897 775 aaKnown RBP21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 FAM189BP81408 668 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 HYAL1Q12794 435 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 CAMK1Q14012 370 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 NCAPH2Q6IBW4 605 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 ANO5Q75V66 913 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 SPPL3Q8TCT6 385 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 POF1BQ8WVV4 589 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 HAS1Q92839 578 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 GCOM2Q9BZD3 368 aaPredicted RBP21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 AAASQ9NRG9 546 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 HCSTQ9UBK5 93 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 PCDHB12Q9Y5F1 795 aa21.81■■□□□ 1.08
UBE2D3-215ENST00000503418 IGKV6-21A0A0C4DH24 114 aa21.8■■□□□ 1.08
UBE2D3-215ENST00000503418 TBX3O15119 743 aa21.8■■□□□ 1.08
UBE2D3-215ENST00000503418 NCK2O43639 380 aa21.8■■□□□ 1.08
UBE2D3-215ENST00000503418 DKC1O60832 514 aaKnown RBP eCLIP21.8■■□□□ 1.08
UBE2D3-215ENST00000503418 TRIM29Q14134 588 aa21.8■■□□□ 1.08
UBE2D3-215ENST00000503418 RHPN2Q8IUC4 686 aa21.8■■□□□ 1.08
UBE2D3-215ENST00000503418 RNF169Q8NCN4 708 aa21.8■■□□□ 1.08
UBE2D3-215ENST00000503418 TYW1Q9NV66 732 aaKnown RBP21.8■■□□□ 1.08
UBE2D3-215ENST00000503418 SUCLA2Q9P2R7 463 aaPredicted RBP21.8■■□□□ 1.08
UBE2D3-215ENST00000503418 A0A087WZ62 844 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 MAFO75444 373 aaPredicted RBP21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 BAG4O95429 457 aaKnown RBP21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 P4HBP07237 508 aaKnown RBP21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 GTF2F1P35269 517 aaKnown RBP eCLIP21.79■■□□□ 1.087e-7■■■□□ 15.7
UBE2D3-215ENST00000503418 NPEPPSP55786 919 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 COL19A1Q14993 1142 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 PUS10Q3MIT2 529 aaKnown RBP21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 ECHDC2Q86YB7 292 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 SLFN12Q8IYM2 578 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 ABI1Q8IZP0 508 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 TNFRSF25Q93038 417 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 PPP2R3CQ969Q6 453 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 JPH2Q9BR39 696 aaPredicted RBP21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 FDXACB1Q9BRP7 624 aaPredicted RBP21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 CYP26B1Q9NR63 512 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 BDP1A6H8Y1 2624 aa21.79■■□□□ 1.08
UBE2D3-215ENST00000503418 GRXCR2A6NFK2 248 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 HOXA2O43364 376 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 IRS1P35568 1242 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 CDC42EP1Q00587 391 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 EPHA7Q15375 998 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 THNSL1Q8IYQ7 743 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 COLGALT1Q8NBJ5 622 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 CEP170P1Q96L14 293 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 NLRP4Q96MN2 994 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 LXNQ9BS40 222 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 TMEM117Q9H0C3 514 aa21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 WRAP73Q9P2S5 460 aaPredicted RBP21.78■■□□□ 1.08
UBE2D3-215ENST00000503418 BTBD18B2RXH4 712 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 CLUL1Q15846 466 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 ADGRD2Q7Z7M1 963 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 KSR1Q8IVT5 923 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 DIS3L2Q8IYB7 885 aaKnown RBP21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 ZNF579Q8NAF0 562 aaKnown RBP21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 SLC7A3Q8WY07 619 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 DYDC2Q96IM9 177 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 CASD1Q96PB1 797 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 CWH43Q9H720 699 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 BMP2KQ9NSY1 1161 aaPredicted RBP21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 RNF19AQ9NV58 838 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 DACT1Q9NYF0 836 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 RGL1Q9NZL6 768 aa21.77■■□□□ 1.08
UBE2D3-215ENST00000503418 ARID2Q68CP9 1835 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 LINC01565O15544 149 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 FGF18O76093 207 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 LAG3P18627 525 aa21.76■■□□□ 1.07
UBE2D3-215ENST00000503418 SFPQP23246 707 aaKnown RBP eCLIP21.76■■□□□ 1.073e-6■□□□□ 10.5
UBE2D3-215ENST00000503418 LTBRP36941 435 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms