RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 TSHZ1Q6ZSZ6 1077 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 MCPH1Q8NEM0 835 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 PSPC1Q8WXF1 523 aaKnown RBP17.31■□□□□ 0.36
CPNE1-228ENST00000498814 HERVK_113Q902F9 699 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 TMEM143Q96AN5 459 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 CDHR5Q9HBB8 845 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 BMP2KQ9NSY1 1161 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-228ENST00000498814 MICAL3Q7RTP6 2002 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 TRIOBPQ9H2D6 2365 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 ASAP2O43150 1006 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 USO1O60763 962 aaKnown RBP17.3■□□□□ 0.36
CPNE1-228ENST00000498814 GHRP10912 638 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 ACTN1P12814 892 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 NCLP19338 710 aaKnown RBP17.3■□□□□ 0.36
CPNE1-228ENST00000498814 TXLNAP40222 546 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 ME1P48163 572 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 KARSQ15046 597 aaKnown RBP17.3■□□□□ 0.36
CPNE1-228ENST00000498814 AXDND1Q5T1B0 1012 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-228ENST00000498814 RASIP1Q5U651 963 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 ZNF410Q86VK4 478 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 DBF4BQ8NFT6 615 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 LEO1Q8WVC0 666 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-228ENST00000498814 PRPF31Q8WWY3 499 aaKnown RBP17.3■□□□□ 0.36
CPNE1-228ENST00000498814 SEPT8Q92599 483 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 CHAMP1Q96JM3 812 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 SPATA32Q96LK8 384 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 PLIN2Q99541 437 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-228ENST00000498814 CCDC39Q9UFE4 941 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 PCDHA7Q9UN72 937 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 GINS2Q9Y248 185 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 COL4A3BPQ9Y5P4 624 aa17.3■□□□□ 0.36
CPNE1-228ENST00000498814 BAIAP3O94812 1187 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 PLCG1P19174 1290 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 ARL2P36404 184 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 LAMTOR4Q0VGL1 99 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 MXD4Q14582 209 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-228ENST00000498814 FAM43BQ6ZT52 329 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-228ENST00000498814 OTOP2Q7RTS6 562 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 RHPN2Q8IUC4 686 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 SYT2Q8N9I0 419 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-228ENST00000498814 RASSF8Q8NHQ8 419 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 TMEM40Q8WWA1 233 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 APBB2Q92870 758 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 PPP1R16BQ96T49 567 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 OSMRQ99650 979 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 IFIH1Q9BYX4 1025 aaKnown RBP17.29■□□□□ 0.36
CPNE1-228ENST00000498814 MTIF3Q9H2K0 278 aaKnown RBP17.29■□□□□ 0.36
CPNE1-228ENST00000498814 AGO3Q9H9G7 860 aaKnown RBP17.29■□□□□ 0.36
CPNE1-228ENST00000498814 MYH11P35749 1972 aa17.29■□□□□ 0.36
CPNE1-228ENST00000498814 ABHD14A-ACY1A0A1B0GW23 586 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 PLA2G4BP0C869 781 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 EIF4BP23588 611 aaKnown RBP17.28■□□□□ 0.36
CPNE1-228ENST00000498814 SLC12A3P55017 1021 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 IKBKEQ14164 716 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 TCTN1Q2MV58 587 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 ODR4Q5SWX8 454 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 RINT1Q6NUQ1 792 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 SHC4Q6S5L8 630 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 KSR1Q8IVT5 923 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 LRRC15Q8TF66 581 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 NLRP7Q8WX94 980 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 RNPC3Q96LT9 517 aaKnown RBP17.28■□□□□ 0.36
CPNE1-228ENST00000498814 BLOC1S4Q9NUP1 217 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 CHMP5Q9NZZ3 219 aa17.28■□□□□ 0.36
CPNE1-228ENST00000498814 NOC2LQ9Y3T9 749 aaKnown RBP17.28■□□□□ 0.36
CPNE1-228ENST00000498814 A0A087WZ62 844 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 EFCAB14O75071 495 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 RPS6KA5O75582 802 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 DARSP14868 501 aaKnown RBP17.27■□□□□ 0.36
CPNE1-228ENST00000498814 CD52P31358 61 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 POU5F1BQ06416 359 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 PAK2Q13177 524 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 RRAGBQ5VZM2 374 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 C1orf186Q6ZWK4 172 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 RAD54LQ92698 747 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 ZNF668Q96K58 619 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-228ENST00000498814 NLRP4Q96MN2 994 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 SCLT1Q96NL6 688 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 FDXACB1Q9BRP7 624 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-228ENST00000498814 RUSC1Q9BVN2 902 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 GCOM2Q9BZD3 368 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-228ENST00000498814 POLR3FQ9H1D9 316 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-228ENST00000498814 KCND2Q9NZV8 630 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 STK17AQ9UEE5 414 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 PADI3Q9ULW8 664 aa17.27■□□□□ 0.36
CPNE1-228ENST00000498814 PTPRSQ13332 1948 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 GPR182O15218 404 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 SSBP05455 408 aaKnown RBP eCLIP17.26■□□□□ 0.35
CPNE1-228ENST00000498814 SRGAP2CP0DJJ0 459 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 GLRA2P23416 452 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 GUCY2CP25092 1073 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 TFDP1Q14186 410 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 FAM102BQ5T8I3 360 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 ADALQ6DHV7 355 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 CCDC73Q6ZRK6 1079 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 MAEAQ7L5Y9 396 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 ASAP3Q8TDY4 903 aa17.26■□□□□ 0.35
CPNE1-228ENST00000498814 LARP4BQ92615 738 aaKnown RBP17.26■□□□□ 0.35
CPNE1-228ENST00000498814 KIFAP3Q92845 792 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms