RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 DSC3Q14574 896 aa19.04■□□□□ 0.64
CDKN2A-209ENST00000498628 EPHA7Q15375 998 aa19.04■□□□□ 0.64
CDKN2A-209ENST00000498628 PTCRAQ6ISU1 281 aaPredicted RBP19.04■□□□□ 0.64
CDKN2A-209ENST00000498628 OTUD6AQ7L8S5 288 aa19.04■□□□□ 0.64
CDKN2A-209ENST00000498628 KLHL23Q8NBE8 558 aa19.04■□□□□ 0.64
CDKN2A-209ENST00000498628 NEK9Q8TD19 979 aa19.04■□□□□ 0.64
CDKN2A-209ENST00000498628 LOXHD1Q8IVV2 1947 aa19.04■□□□□ 0.64
CDKN2A-209ENST00000498628 MAFO75444 373 aaPredicted RBP19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 SFPQP23246 707 aaKnown RBP eCLIP19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 FAM102BQ5T8I3 360 aa19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 ZNF410Q86VK4 478 aa19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 SPPL3Q8TCT6 385 aa19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 OXER1Q8TDS5 423 aa19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 SLC7A3Q8WY07 619 aa19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 C1QTNF1Q9BXJ1 281 aa19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 TMEM117Q9H0C3 514 aa19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 CHST12Q9NRB3 414 aa19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 SUCLA2Q9P2R7 463 aaPredicted RBP19.03■□□□□ 0.64
CDKN2A-209ENST00000498628 TCF20Q9UGU0 1960 aaKnown RBP19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 IGKV6-21A0A0C4DH24 114 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 EOMESO95936 686 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 ITGB1P05556 798 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 SKIP12755 728 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 LAG3P18627 525 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 GATMP50440 423 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 SAFBQ15424 915 aaKnown RBP eCLIP19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 THNSL1Q8IYQ7 743 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 MICAL1Q8TDZ2 1067 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 POF1BQ8WVV4 589 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 IGFLR1Q9H665 355 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 GJB4Q9NTQ9 266 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 TYW1Q9NV66 732 aaKnown RBP19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 PUF60Q9UHX1 559 aaKnown RBP19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 VAV3Q9UKW4 847 aa19.02■□□□□ 0.64
CDKN2A-209ENST00000498628 FSD2A1L4K1 749 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 GRXCR2A6NFK2 248 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 H3BQ06 376 aaPredicted RBP19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 EML1O00423 815 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 STBD1O95210 358 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 FDPSP14324 419 aaKnown RBP19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 RFC5P40937 340 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 COL19A1Q14993 1142 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 NCAPH2Q6IBW4 605 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 PDE12Q6L8Q7 609 aaKnown RBP19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 ANO5Q75V66 913 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 ECHDC2Q86YB7 292 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 RHPN2Q8IUC4 686 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 C4orf19Q8IY42 314 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 NSUN7Q8NE18 718 aaKnown RBP19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 RSPH1Q8WYR4 309 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 ZNF668Q96K58 619 aaPredicted RBP19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 CEP170P1Q96L14 293 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 ZSWIM4Q9H7M6 989 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 CYP26B1Q9NR63 512 aa19.01■□□□□ 0.63
CDKN2A-209ENST00000498628 A0A0U1RQF3 1178 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 GAS2O43903 313 aaKnown RBP19■□□□□ 0.63
CDKN2A-209ENST00000498628 POLGP54098 1239 aaPredicted RBP19■□□□□ 0.63
CDKN2A-209ENST00000498628 NR5A1Q13285 461 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 POTEDQ86YR6 584 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 RNF169Q8NCN4 708 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 TCP11Q8WWU5 503 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 HAS1Q92839 578 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 CEP89Q96ST8 783 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 PCDHA12Q9UN75 941 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 LIMCH1Q9UPQ0 1083 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 VCANP13611 3396 aa19■□□□□ 0.63
CDKN2A-209ENST00000498628 A0A087WZ62 844 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 CARNS1A5YM72 827 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 CSPG5O95196 566 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 FGFR1P11362 822 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 SSTR3P32745 418 aaPredicted RBP18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 KRT17Q04695 432 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 HYAL1Q12794 435 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 CALCRLQ16602 461 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 FAM178BQ8IXR5 827 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 DIS3L2Q8IYB7 885 aaKnown RBP18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 LRRC43Q8N309 656 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 COLGALT1Q8NBJ5 622 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 SH2D3AQ9BRG2 576 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 FDXACB1Q9BRP7 624 aaPredicted RBP18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 LXNQ9BS40 222 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 MRPL9Q9BYD2 267 aaKnown RBP18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 PRKAG3Q9UGI9 489 aa18.99■□□□□ 0.63
CDKN2A-209ENST00000498628 TTC28Q96AY4 2481 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 TMEM150BA6NC51 233 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 BTBD18B2RXH4 712 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 ASAP2O43150 1006 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 FGF18O76093 207 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 LARGE1O95461 756 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 IL9P15248 144 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 YWHABP31946 246 aaKnown RBP18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 PPM1AP35813 382 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 DRP2Q13474 957 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 CTC1Q2NKJ3 1217 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 PLA2G4FQ68DD2 849 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 TWF2Q6IBS0 349 aaKnown RBP18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 CATSPER4Q7RTX7 472 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 GJD3Q8N144 294 aa18.98■□□□□ 0.63
CDKN2A-209ENST00000498628 PSPC1Q8WXF1 523 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms