RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 TNFRSF25Q93038 417 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 ZNF668Q96K58 619 aaPredicted RBP9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 SCLT1Q96NL6 688 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 CEP89Q96ST8 783 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 UHRF1Q96T88 793 aaPredicted RBP9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 SH2D3AQ9BRG2 576 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 PLVAPQ9BX97 442 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 ADAMTS10Q9H324 1103 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 VAV3Q9UKW4 847 aa9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 MRPL42Q9Y6G3 142 aaKnown RBP9.52□□□□□ -0.89
HMGXB4-207ENST00000498212 A0A0C4DFX4 3053 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 POTEMA6NI47 508 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 DDX11L8A8MPP1 907 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 BTBD18B2RXH4 712 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 BAG4O95429 457 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 P4HBP07237 508 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 EIF4BP23588 611 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 QARSP47897 775 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 DNM2P50570 870 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 FOSBP53539 338 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 ST3GAL1Q11201 340 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 DRP2Q13474 957 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 DSC3Q14574 896 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 TCEAL5Q5H9L2 206 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 NCAPH2Q6IBW4 605 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 ANO5Q75V66 913 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 DIS3L2Q8IYB7 885 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 NLRP7Q8WX94 980 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 HAS1Q92839 578 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 P2RX5Q93086 422 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 LMAN2LQ9H0V9 348 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 NSUN3Q9H649 340 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 ELAC1Q9H777 363 aaKnown RBP9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 UBE2ZQ9H832 354 aaPredicted RBP9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 METRNQ9UJH8 293 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 LIMCH1Q9UPQ0 1083 aa9.51□□□□□ -0.89
HMGXB4-207ENST00000498212 IGKV6-21A0A0C4DH24 114 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 TBKBP1A7MCY6 615 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 GRM6O15303 877 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 ATMINO43313 823 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 MAFO75444 373 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 DARSP14868 501 aaKnown RBP9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 ZSCAN20P17040 1043 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 GATMP50440 423 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 CDC42EP1Q00587 391 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 EPHA7Q15375 998 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 C8orf34Q49A92 452 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 NAALADL2Q58DX5 795 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 SPOUT1Q5T280 376 aaKnown RBP9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 FAM102BQ5T8I3 360 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 PLA2G4FQ68DD2 849 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 CCDC83Q8IWF9 413 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 ZSCAN31Q96LW9 406 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 JPH2Q9BR39 696 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 LXNQ9BS40 222 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 GCOM2Q9BZD3 368 aaPredicted RBP9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 ATP6V0A4Q9HBG4 840 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 ALG13Q9NP73 1137 aaKnown RBP9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 CYP26B1Q9NR63 512 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 TMEM161AQ9NX61 479 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 PLAGL2Q9UPG8 496 aa9.5□□□□□ -0.89
HMGXB4-207ENST00000498212 VCANP13611 3396 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 TDRD15B5MCY1 1934 aaKnown RBP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 A0A087WZ62 844 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 HOXA2O43364 376 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 NEMFO60524 1076 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 CSPG5O95196 566 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 ITGB1P05556 798 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 FGFR1P11362 822 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 FGFR4P22455 802 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 KCNA5P22460 613 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 POLGP54098 1239 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 NPEPPSP55786 919 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 FAM189BP81408 668 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 CYP4A11Q02928 519 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 SPIRE1Q08AE8 756 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 SAFBQ15424 915 aaKnown RBP eCLIP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 CALCRLQ16602 461 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 LEXMQ3ZCV2 418 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 EP400NLQ6ZTU2 488 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 ZNF410Q86VK4 478 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 RHPN2Q8IUC4 686 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 C4orf19Q8IY42 314 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 EXOC8Q8IYI6 725 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 KLHL23Q8NBE8 558 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 SLC7A3Q8WY07 619 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 PABPC5Q96DU9 382 aaKnown RBP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 DYDC2Q96IM9 177 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 CEP170P1Q96L14 293 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 NECAB3Q96P71 396 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 FDXACB1Q9BRP7 624 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 LLPHQ9BRT6 129 aaKnown RBP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 INO80BQ9C086 356 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 AAASQ9NRG9 546 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 SUCLA2Q9P2R7 463 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 WRAP73Q9P2S5 460 aaPredicted RBP9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 PCDHA12Q9UN75 941 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 PPME1Q9Y570 386 aa9.49□□□□□ -0.89
HMGXB4-207ENST00000498212 PCDHB12Q9Y5F1 795 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms