RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 FSHBP01225 129 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 ID4P47928 161 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 MEOX1P50221 254 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 EFEMP1Q12805 493 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 DGKDQ16760 1214 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 TBC1D10BQ4KMP7 808 aaPredicted RBP4.03□□□□□ -1.76
RIF1-212ENST00000498041 BROXQ5VW32 411 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 TRIM68Q6AZZ1 485 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 KIAA1841Q6NSI8 718 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 FRMD7Q6ZUT3 714 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 ESPNLQ6ZVH7 1005 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 LARP4Q71RC2 724 aaKnown RBP eCLIP4.03□□□□□ -1.76
RIF1-212ENST00000498041 KANSL1Q7Z3B3 1105 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 FILIP1Q7Z7B0 1213 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 RTKN2Q8IZC4 609 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 ZNF496Q96IT1 587 aaPredicted RBP4.03□□□□□ -1.76
RIF1-212ENST00000498041 MYL10Q9BUA6 226 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 POFUT1Q9H488 388 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 JADE2Q9NQC1 790 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 SAE1Q9UBE0 346 aaPredicted RBP4.03□□□□□ -1.76
RIF1-212ENST00000498041 MSRAQ9UJ68 235 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 PTPN22Q9Y2R2 807 aa4.03□□□□□ -1.76
RIF1-212ENST00000498041 CCDC180Q9P1Z9 1646 aa4.03□□□□□ -1.77
RIF1-212ENST00000498041 AKAP8O43823 692 aaKnown RBP4.02□□□□□ -1.77
RIF1-212ENST00000498041 EYA4O95677 639 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 STAT5BP51692 787 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 EPHB4P54760 987 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 RRADP55042 308 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 SESN2P58004 480 aaPredicted RBP4.02□□□□□ -1.77
RIF1-212ENST00000498041 SESN3P58005 492 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 PCOLCEQ15113 449 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 BMP8AQ7Z5Y6 402 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 RASSF3Q86WH2 238 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 BCL6BQ8N143 479 aaPredicted RBP4.02□□□□□ -1.77
RIF1-212ENST00000498041 OR5AN1Q8NGI8 311 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 FERMT2Q96AC1 680 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 PITHD1Q9GZP4 211 aaPredicted RBP4.02□□□□□ -1.77
RIF1-212ENST00000498041 SEMA4AQ9H3S1 761 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 SEC61A2Q9H9S3 476 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 KCNG1Q9UIX4 513 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 SYNPO2Q9UMS6 1093 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 VWA7Q9Y334 891 aa4.02□□□□□ -1.77
RIF1-212ENST00000498041 NOC2LQ9Y3T9 749 aaKnown RBP4.02□□□□□ -1.77
RIF1-212ENST00000498041 A0A0A6YYJ9 748 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 ST20-MTHFSA0A0A6YYL1 179 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 NPEPPSL1A6NEC2 478 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 ELL2O00472 640 aaPredicted RBP4.01□□□□□ -1.77
RIF1-212ENST00000498041 SUV39H1O43463 412 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 H2AFYO75367 372 aaKnown RBP4.01□□□□□ -1.77
RIF1-212ENST00000498041 CNOT4O95628 575 aaKnown RBP4.01□□□□□ -1.77
RIF1-212ENST00000498041 ITGB3P05106 788 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 MRE11P49959 708 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 ANTXR2P58335 489 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 ZXDAP98168 799 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 STAT4Q14765 748 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 AGBL4Q5VU57 503 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 SLFN13Q68D06 897 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 KLHDC10Q6PID8 442 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 GLB1LQ6UWU2 654 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 UNQ6494/PRO21346Q6UXR6 183 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 ZNF662Q6ZS27 426 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 USP30Q70CQ3 517 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 HDGFL2Q7Z4V5 671 aaPredicted RBP4.01□□□□□ -1.77
RIF1-212ENST00000498041 GFM2Q969S9 779 aaKnown RBP4.01□□□□□ -1.77
RIF1-212ENST00000498041 KIAA1683Q9H0B3 1180 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 OR10A2Q9H208 303 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 MS4A5Q9H3V2 200 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 MTG2Q9H4K7 406 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 PPP4R1LQ9P1A2 415 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 MAGEL2Q9UJ55 1249 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 CNOT11Q9UKZ1 510 aaKnown RBP4.01□□□□□ -1.77
RIF1-212ENST00000498041 DENND2AQ9ULE3 1009 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 NR2E1Q9Y466 385 aa4.01□□□□□ -1.77
RIF1-212ENST00000498041 MYPNQ86TC9 1320 aa4□□□□□ -1.77
RIF1-212ENST00000498041 LCHNA4D1U4 455 aa4□□□□□ -1.77
RIF1-212ENST00000498041 ARHGAP6O43182 974 aa4□□□□□ -1.77
RIF1-212ENST00000498041 KDM1AO60341 852 aa4□□□□□ -1.77
RIF1-212ENST00000498041 OPHN1O60890 802 aa4□□□□□ -1.77
RIF1-212ENST00000498041 CANXP27824 592 aaKnown RBP4□□□□□ -1.77
RIF1-212ENST00000498041 RAC3P60763 192 aa4□□□□□ -1.77
RIF1-212ENST00000498041 FAPQ12884 760 aa4□□□□□ -1.77
RIF1-212ENST00000498041 NFYCQ13952 458 aa4□□□□□ -1.77
RIF1-212ENST00000498041 RNF151Q2KHN1 245 aa4□□□□□ -1.77
RIF1-212ENST00000498041 RNF219Q5W0B1 726 aaPredicted RBP4□□□□□ -1.77
RIF1-212ENST00000498041 CXorf67Q86X51 503 aaPredicted RBP4□□□□□ -1.77
RIF1-212ENST00000498041 CLRN3Q8NCR9 226 aa4□□□□□ -1.77
RIF1-212ENST00000498041 ATL2Q8NHH9 583 aa4□□□□□ -1.77
RIF1-212ENST00000498041 WDR66Q8TBY9 1149 aa4□□□□□ -1.77
RIF1-212ENST00000498041 LPPQ93052 612 aa4□□□□□ -1.77
RIF1-212ENST00000498041 NEIL1Q96FI4 390 aaPredicted RBP4□□□□□ -1.77
RIF1-212ENST00000498041 DYDC2Q96IM9 177 aa4□□□□□ -1.77
RIF1-212ENST00000498041 HIST1H2AHQ96KK5 128 aa4□□□□□ -1.77
RIF1-212ENST00000498041 WDR92Q96MX6 357 aa4□□□□□ -1.77
RIF1-212ENST00000498041 LMF1Q96S06 567 aa4□□□□□ -1.77
RIF1-212ENST00000498041 RBM15Q96T37 977 aaKnown RBP eCLIP4□□□□□ -1.77
RIF1-212ENST00000498041 HIST1H2AJQ99878 128 aa4□□□□□ -1.77
RIF1-212ENST00000498041 NOL10Q9BSC4 688 aaKnown RBP4□□□□□ -1.77
RIF1-212ENST00000498041 HAPLN2Q9GZV7 340 aa4□□□□□ -1.77
RIF1-212ENST00000498041 WNT8AQ9H1J5 351 aa4□□□□□ -1.77
RIF1-212ENST00000498041 POLR3BQ9NW08 1133 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms