RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ORAI3Q9BRQ5 295 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 C12orf65Q9H3J6 166 aaKnown RBP4.67□□□□□ -1.66
PSPC1-205ENST00000497722 C11orf21Q9P2W6 132 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 HECAQ9UBI9 543 aaPredicted RBP4.67□□□□□ -1.66
PSPC1-205ENST00000497722 CD2APQ9Y5K6 639 aa4.67□□□□□ -1.66
PSPC1-205ENST00000497722 CBX4O00257 560 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 ACRV1P26436 265 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 HSD3B2P26439 372 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 MSX2P35548 267 aaPredicted RBP4.66□□□□□ -1.66
PSPC1-205ENST00000497722 RGS3P49796 1198 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 MEOX1P50221 254 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 KIF11P52732 1056 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 KLF10Q13118 480 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 USP39Q53GS9 565 aaKnown RBP4.66□□□□□ -1.66
PSPC1-205ENST00000497722 SPTY2D1Q68D10 685 aaPredicted RBP4.66□□□□□ -1.66
PSPC1-205ENST00000497722 CNNM4Q6P4Q7 775 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 UBE2R2Q712K3 238 aaPredicted RBP4.66□□□□□ -1.66
PSPC1-205ENST00000497722 ZNF575Q86XF7 245 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 RABGGTAQ92696 567 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 FAM89AQ96GI7 184 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 MAML3Q96JK9 1138 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 ZNF703Q9H7S9 590 aaPredicted RBP4.66□□□□□ -1.66
PSPC1-205ENST00000497722 ACSS2Q9NR19 701 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 B4GALT6Q9UBX8 382 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 TBX22Q9Y458 520 aa4.66□□□□□ -1.66
PSPC1-205ENST00000497722 PTPDC1A2A3K4 754 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 C2orf78A6NCI8 922 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 NEK4P51957 841 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 SLC6A3Q01959 620 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 MAP3K12Q12852 859 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 PABPC4Q13310 644 aaKnown RBP eCLIP4.65□□□□□ -1.67
PSPC1-205ENST00000497722 ADAM15Q13444 863 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 GRM7Q14831 915 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 EPHA7Q15375 998 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 KLHDC10Q6PID8 442 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 KANSL1Q7Z3B3 1105 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 ADGRE4PQ86SQ3 457 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 SHCBP1Q8NEM2 672 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 OR5AN1Q8NGI8 311 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 WDR48Q8TAF3 677 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 CACTINQ8WUQ7 758 aaKnown RBP4.65□□□□□ -1.67
PSPC1-205ENST00000497722 ERCC4Q92889 916 aaPredicted RBP4.65□□□□□ -1.67
PSPC1-205ENST00000497722 LPPQ93052 612 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 PLAAQ9Y263 795 aa4.65□□□□□ -1.67
PSPC1-205ENST00000497722 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 NPIPB8E9PQR5 432 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 ENPP3O14638 875 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 NARSO43776 548 aaKnown RBP4.64□□□□□ -1.67
PSPC1-205ENST00000497722 CYP17A1P05093 508 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 PTX3P26022 381 aaPredicted RBP4.64□□□□□ -1.67
PSPC1-205ENST00000497722 INHBEP58166 350 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 DGCR2P98153 550 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 PURAQ00577 322 aaKnown RBP4.64□□□□□ -1.67
PSPC1-205ENST00000497722 ROM1Q03395 351 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 RIN1Q13671 783 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 MYBPC3Q14896 1274 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 SART3Q15020 963 aaKnown RBP4.64□□□□□ -1.67
PSPC1-205ENST00000497722 NRN1LQ496H8 165 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 CT47A1Q5JQC4 288 aaPredicted RBP4.64□□□□□ -1.67
PSPC1-205ENST00000497722 CDCA2Q69YH5 1023 aaPredicted RBP4.64□□□□□ -1.67
PSPC1-205ENST00000497722 ESRP1Q6NXG1 681 aaKnown RBP4.64□□□□□ -1.67
PSPC1-205ENST00000497722 DHX37Q8IY37 1157 aaKnown RBP4.64□□□□□ -1.67
PSPC1-205ENST00000497722 NIM1KQ8IY84 436 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 KIAA1958Q8N8K9 716 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 E2F7Q96AV8 911 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 GPHA2Q96T91 129 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 TLR9Q9NR96 1032 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 CEP72Q9P209 647 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 ING1Q9UK53 422 aaPredicted RBP4.64□□□□□ -1.67
PSPC1-205ENST00000497722 HS3ST3A1Q9Y663 406 aa4.64□□□□□ -1.67
PSPC1-205ENST00000497722 UBA6A0AVT1 1052 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 KRT37O76014 449 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 C1SP09871 688 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 POU3F2P20265 443 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 CNGA1P29973 690 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 STAT3P40763 770 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 SESN2P58004 480 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 TGFB2P61812 414 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 ATP2C1P98194 919 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 ACAP1Q15027 740 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 TKFCQ3LXA3 575 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 TTC38Q5R3I4 469 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 RNF187Q5TA31 235 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 PIK3R6Q5UE93 754 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 FNDC7Q5VTL7 733 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 SLFN12LQ6IEE8 588 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 CLEC14AQ86T13 490 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 SLC7A6OSQ96CW6 309 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 ELF4Q99607 663 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 PITHD1Q9GZP4 211 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 SLC6A15Q9H2J7 730 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 CABP5Q9NP86 173 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 INTS7Q9NVH2 962 aaKnown RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 KCMF1Q9P0J7 381 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 SAE1Q9UBE0 346 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 MAGEC2Q9UBF1 373 aaPredicted RBP4.63□□□□□ -1.67
PSPC1-205ENST00000497722 MAGEL2Q9UJ55 1249 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 DENND2AQ9ULE3 1009 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 FAM184BQ9ULE4 1060 aa4.63□□□□□ -1.67
PSPC1-205ENST00000497722 SH3BP1Q9Y3L3 701 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms