RNA–Protein interactions for RNA: ENST00000497391.5

HCLS1-212, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-212ENST00000497391 MCPH1Q8NEM0 835 aa18.39■□□□□ 0.53
HCLS1-212ENST00000497391 TOP1MTQ969P6 601 aa18.39■□□□□ 0.53
HCLS1-212ENST00000497391 CDK5RAP3Q96JB5 506 aa18.39■□□□□ 0.53
HCLS1-212ENST00000497391 TSPYL2Q9H2G4 693 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-212ENST00000497391 TTYH1Q9H313 450 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-212ENST00000497391 ZSCAN16Q9H4T2 348 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-212ENST00000497391 DHX33Q9H6R0 707 aaKnown RBP18.39■□□□□ 0.53
HCLS1-212ENST00000497391 ERVK-5Q9HDB9 667 aa18.39■□□□□ 0.53
HCLS1-212ENST00000497391 BMP2KQ9NSY1 1161 aaPredicted RBP18.39■□□□□ 0.53
HCLS1-212ENST00000497391 DBR1Q9UK59 544 aaKnown RBP18.39■□□□□ 0.53
HCLS1-212ENST00000497391 ENPP3O14638 875 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 STX6O43752 255 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 MYOGP15173 224 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 FOSL2P15408 326 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 PHKA2P46019 1235 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
HCLS1-212ENST00000497391 POTEGQ6S5H5 508 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 NPAS4Q8IUM7 802 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 C4orf32Q8N8J7 132 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 IGSF22Q8N9C0 903 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 PIGOQ8TEQ8 1089 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 CDX2Q99626 313 aaPredicted RBP18.38■□□□□ 0.53
HCLS1-212ENST00000497391 ADAMTS10Q9H324 1103 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 STXBP5LQ9Y2K9 1186 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 MICAL3Q7RTP6 2002 aa18.38■□□□□ 0.53
HCLS1-212ENST00000497391 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.37■□□□□ 0.53
HCLS1-212ENST00000497391 USO1O60763 962 aaKnown RBP18.37■□□□□ 0.53
HCLS1-212ENST00000497391 MED24O75448 989 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 IBSPP21815 317 aaPredicted RBP18.37■□□□□ 0.53
HCLS1-212ENST00000497391 RARRES1P49788 294 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 MKRN4PQ13434 485 aaPredicted RBP18.37■□□□□ 0.53
HCLS1-212ENST00000497391 TMCO2Q7Z6W1 182 aaPredicted RBP18.37■□□□□ 0.53
HCLS1-212ENST00000497391 FAM228AQ86W67 206 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 RASSF8Q8NHQ8 419 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 TMEM40Q8WWA1 233 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 TMEM143Q96AN5 459 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 AK8Q96MA6 479 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 CEP89Q96ST8 783 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 ADAM2Q99965 735 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 OSBPL7Q9BZF2 842 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 CDHR5Q9HBB8 845 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 PCDHB7Q9Y5E2 793 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 EVPLQ92817 2033 aa18.37■□□□□ 0.53
HCLS1-212ENST00000497391 A0A087WZ62 844 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 VWA3AA6NCI4 1184 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 SPATA31C1P0DKV0 1188 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 SIP14410 1827 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 SARSP49591 514 aaKnown RBP18.36■□□□□ 0.53
HCLS1-212ENST00000497391 LAMTOR4Q0VGL1 99 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 DRP2Q13474 957 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 SLC24A5Q71RS6 500 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 CATSPER4Q7RTX7 472 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 PRPF31Q8WWY3 499 aaKnown RBP18.36■□□□□ 0.53
HCLS1-212ENST00000497391 ZNF668Q96K58 619 aaPredicted RBP18.36■□□□□ 0.53
HCLS1-212ENST00000497391 GUCD1Q96NT3 240 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 SAMD11Q96NU1 681 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 TGS1Q96RS0 853 aaKnown RBP18.36■□□□□ 0.53
HCLS1-212ENST00000497391 FDXACB1Q9BRP7 624 aaPredicted RBP18.36■□□□□ 0.53
HCLS1-212ENST00000497391 NT5C3AQ9H0P0 336 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 KIAA1024Q9UPX6 916 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 DNM3Q9UQ16 869 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 RWDD3Q9Y3V2 267 aa18.36■□□□□ 0.53
HCLS1-212ENST00000497391 ZBTB39O15060 712 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 HOXA2O43364 376 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 GTPBP6O43824 516 aaPredicted RBP18.35■□□□□ 0.53
HCLS1-212ENST00000497391 SRGAP2CP0DJJ0 459 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 SKIP12755 728 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 HTRA4P83105 476 aaPredicted RBP18.35■□□□□ 0.53
HCLS1-212ENST00000497391 BECN1Q14457 450 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 GRIN2CQ14957 1233 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 PCBP1Q15365 356 aaKnown RBP eCLIP18.35■□□□□ 0.53
HCLS1-212ENST00000497391 ZRSR1Q15695 479 aaKnown RBP18.35■□□□□ 0.53
HCLS1-212ENST00000497391 SRGAP1Q7Z6B7 1085 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 FIBCD1Q8N539 461 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 KCTD17Q8N5Z5 321 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 ZNF579Q8NAF0 562 aaKnown RBP18.35■□□□□ 0.53
HCLS1-212ENST00000497391 MYLIPQ8WY64 445 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 ARNTL2Q8WYA1 636 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 PRDM12Q9H4Q4 367 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 CHST12Q9NRB3 414 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 RGS18Q9NS28 235 aa18.35■□□□□ 0.53
HCLS1-212ENST00000497391 DDX19AQ9NUU7 478 aaKnown RBP18.35■□□□□ 0.53
HCLS1-212ENST00000497391 ADGRA3Q8IWK6 1321 aa18.34■□□□□ 0.53
HCLS1-212ENST00000497391 SLC26A4O43511 780 aa18.34■□□□□ 0.53
HCLS1-212ENST00000497391 ERLIN2O94905 339 aa18.34■□□□□ 0.53
HCLS1-212ENST00000497391 TAP1Q03518 808 aa18.34■□□□□ 0.53
HCLS1-212ENST00000497391 BTG3Q14201 252 aaPredicted RBP18.34■□□□□ 0.53
HCLS1-212ENST00000497391 ABI1Q8IZP0 508 aa18.34■□□□□ 0.53
HCLS1-212ENST00000497391 RNF149Q8NC42 400 aa18.34■□□□□ 0.53
HCLS1-212ENST00000497391 CALML4Q96GE6 196 aa18.34■□□□□ 0.53
HCLS1-212ENST00000497391 POLR3FQ9H1D9 316 aaPredicted RBP18.34■□□□□ 0.53
HCLS1-212ENST00000497391 PIN4Q9Y237 131 aaKnown RBP18.34■□□□□ 0.53
HCLS1-212ENST00000497391 SZT2Q5T011 3432 aa18.34■□□□□ 0.53
HCLS1-212ENST00000497391 GBF1Q92538 1859 aa18.33■□□□□ 0.53
HCLS1-212ENST00000497391 LINC01553A4QN01 128 aa18.33■□□□□ 0.52
HCLS1-212ENST00000497391 IGFBP4P22692 258 aa18.33■□□□□ 0.52
HCLS1-212ENST00000497391 LONP1P36776 959 aaKnown RBP18.33■□□□□ 0.52
HCLS1-212ENST00000497391 TXLNAP40222 546 aa18.33■□□□□ 0.52
HCLS1-212ENST00000497391 UBA7P41226 1012 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms