RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TERF2Q15554 542 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 CCDC181Q5TID7 509 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 BROXQ5VW32 411 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 KANK2Q63ZY3 851 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 GPR155Q7Z3F1 870 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 RASSF3Q86WH2 238 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 CLRN3Q8NCR9 226 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 CHMP4CQ96CF2 233 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 ELF4Q99607 663 aaPredicted RBP5.4□□□□□ -1.54
SMC4-225ENST00000497203 SMAD5Q99717 465 aaKnown RBP5.4□□□□□ -1.54
SMC4-225ENST00000497203 BDH2Q9BUT1 245 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 KATNBL1Q9H079 304 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 OR10A5Q9H207 317 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 PTPN22Q9Y2R2 807 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 NOC2LQ9Y3T9 749 aaKnown RBP5.4□□□□□ -1.54
SMC4-225ENST00000497203 B4GALT4O60513 344 aa5.39□□□□□ -1.55
SMC4-225ENST00000497203 PARNO95453 639 aaKnown RBP5.39□□□□□ -1.55
SMC4-225ENST00000497203 ZNF888P0CJ79 500 aaPredicted RBP5.39□□□□□ -1.55
SMC4-225ENST00000497203 POLD1P28340 1107 aa5.39□□□□□ -1.55
SMC4-225ENST00000497203 TOP3AQ13472 1001 aaPredicted RBP5.39□□□□□ -1.55
SMC4-225ENST00000497203 EPHA7Q15375 998 aa5.39□□□□□ -1.55
SMC4-225ENST00000497203 TBC1D10BQ4KMP7 808 aaPredicted RBP5.39□□□□□ -1.55
SMC4-225ENST00000497203 HSP90AB2PQ58FF8 381 aa5.39□□□□□ -1.55
SMC4-225ENST00000497203 CXXC5Q7LFL8 322 aaKnown RBP5.39□□□□□ -1.55
SMC4-225ENST00000497203 ZBTB46Q86UZ6 589 aa5.39□□□□□ -1.55
SMC4-225ENST00000497203 E2F7Q96AV8 911 aa5.39□□□□□ -1.55
SMC4-225ENST00000497203 TRIM8Q9BZR9 551 aa5.39□□□□□ -1.55
SMC4-225ENST00000497203 USP36Q9P275 1121 aaKnown RBP5.39□□□□□ -1.55
SMC4-225ENST00000497203 CHPF2Q9P2E5 772 aa5.39□□□□□ -1.55
SMC4-225ENST00000497203 THRAP3Q9Y2W1 955 aaKnown RBP5.39□□□□□ -1.55
SMC4-225ENST00000497203 EID1Q9Y6B2 187 aa5.39□□□□□ -1.55
SMC4-225ENST00000497203 SHTN1A0MZ66 631 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 GABRDO14764 452 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 ALDH6A1Q02252 535 aaKnown RBP5.38□□□□□ -1.55
SMC4-225ENST00000497203 KLF1Q13351 362 aaPredicted RBP5.38□□□□□ -1.55
SMC4-225ENST00000497203 ESRP1Q6NXG1 681 aaKnown RBP5.38□□□□□ -1.55
SMC4-225ENST00000497203 FRMD7Q6ZUT3 714 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 RALYLQ86SE5 291 aaKnown RBP5.38□□□□□ -1.55
SMC4-225ENST00000497203 REXO1L1PQ8IX06 675 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 CCDC136Q96JN2 1154 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 C16orf92Q96LL3 132 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 FOXB1Q99853 325 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 PCGF6Q9BYE7 350 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 ZDHHC5Q9C0B5 715 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 CCDC8Q9H0W5 538 aaPredicted RBP5.38□□□□□ -1.55
SMC4-225ENST00000497203 KCNG1Q9UIX4 513 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 CDC42EP3Q9UKI2 254 aa5.38□□□□□ -1.55
SMC4-225ENST00000497203 LAMTOR5O43504 91 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 CUTAO60888 179 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 PLATP00750 562 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 CFBP00751 764 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 PRLP01236 227 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 ETV4P43268 484 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 RGS3P49796 1198 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 KCNQ1P51787 676 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 ERVK-21P61565 698 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 SLC6A3Q01959 620 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 MCL1Q07820 350 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 MOGSQ13724 837 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 LARP4Q71RC2 724 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMC4-225ENST00000497203 PLEKHH3Q7Z736 793 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 WDR48Q8TAF3 677 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 CALML6Q8TD86 181 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 ACAP3Q96P50 834 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 RBM15Q96T37 977 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMC4-225ENST00000497203 PTPN18Q99952 460 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 CARD11Q9BXL7 1154 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 ZMAT4Q9H898 229 aa5.37□□□□□ -1.55
SMC4-225ENST00000497203 KDM1AO60341 852 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 CNOT4O95628 575 aaKnown RBP5.36□□□□□ -1.55
SMC4-225ENST00000497203 CELA3BP08861 270 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 CCND1P24385 295 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 APEX1P27695 318 aaKnown RBP5.36□□□□□ -1.55
SMC4-225ENST00000497203 EPHB4P54760 987 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 PPP2CBP62714 309 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 PPP2CAP67775 309 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 KRT85P78386 507 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 PLP2Q04941 152 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 USP10Q14694 798 aaKnown RBP5.36□□□□□ -1.55
SMC4-225ENST00000497203 EIF4HQ15056 248 aaKnown RBP5.36□□□□□ -1.55
SMC4-225ENST00000497203 PPP2R5AQ15172 486 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 NFE2Q16621 373 aaPredicted RBP5.36□□□□□ -1.55
SMC4-225ENST00000497203 TMEM200BQ69YZ2 307 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 NOL8Q76FK4 1167 aaKnown RBP5.36□□□□□ -1.55
SMC4-225ENST00000497203 OTOP2Q7RTS6 562 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 GGNQ86UU5 652 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 FMNL3Q8IVF7 1028 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 AMOTL1Q8IY63 956 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 CAMKK2Q96RR4 588 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 SSBP3Q9BWW4 388 aaPredicted RBP5.36□□□□□ -1.55
SMC4-225ENST00000497203 SLC13A1Q9BZW2 595 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 VTA1Q9NP79 307 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 AASDHPPTQ9NRN7 309 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 C14orf119Q9NWQ9 140 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 PPP4R1LQ9P1A2 415 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 FBXO10Q9UK96 956 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 ZNF536O15090 1300 aa5.36□□□□□ -1.55
SMC4-225ENST00000497203 TNKSO95271 1327 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 A0A0G2JNJ9 132 aa5.35□□□□□ -1.55
SMC4-225ENST00000497203 UBA6A0AVT1 1052 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms