RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 AKNAD1Q5T1N1 836 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 BTNL9Q6UXG8 535 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 LINC00114Q6XXX2 140 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 C8orf86Q6ZUL3 223 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 CHURC1Q8WUH1 139 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 NUDT8Q8WV74 236 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 TTC9Q92623 222 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 SMG9Q9H0W8 520 aaKnown RBP7.5□□□□□ -1.21
HOXA9-206ENST00000497089 RNF41Q9H4P4 317 aaPredicted RBP7.5□□□□□ -1.21
HOXA9-206ENST00000497089 JPH1Q9HDC5 661 aaPredicted RBP7.5□□□□□ -1.21
HOXA9-206ENST00000497089 FAM53CQ9NYF3 392 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 FBXO40Q9UH90 709 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 GGT7Q9UJ14 662 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 STX8Q9UNK0 236 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 SYNGAP1Q96PV0 1343 aa7.5□□□□□ -1.21
HOXA9-206ENST00000497089 TMEM232C9JQI7 657 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 LILRB5O75023 590 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 PGK2P07205 417 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 ZNF865P0CJ78 1059 aaPredicted RBP7.49□□□□□ -1.21
HOXA9-206ENST00000497089 SNHG28P0DPA3 235 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 MCCP23508 829 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 GUCY2CP25092 1073 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 CNGA1P29973 690 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 BMP8BP34820 402 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 NOP2P46087 812 aaKnown RBP7.49□□□□□ -1.21
HOXA9-206ENST00000497089 GRIA4P48058 902 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 FXR1P51114 621 aaKnown RBP eCLIP7.49□□□□□ -1.21
HOXA9-206ENST00000497089 TKFCQ3LXA3 575 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 TTC22Q5TAA0 569 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 CWC27Q6UX04 472 aaKnown RBP7.49□□□□□ -1.21
HOXA9-206ENST00000497089 MFSD6Q6ZSS7 791 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 TBC1D10CQ8IV04 446 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 CNPY4Q8N129 248 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 ARRDC4Q8NCT1 418 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 C3orf58Q8NDZ4 430 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 KIAA1524Q8TCG1 905 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 DCAF4Q8WV16 495 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 FGD4Q96M96 766 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 HHIPQ96QV1 700 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 GDF15Q99988 308 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 DSCC1Q9BVC3 393 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 CCSER2Q9H7U1 834 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 RAVER2Q9HCJ3 691 aaKnown RBP7.49□□□□□ -1.21
HOXA9-206ENST00000497089 RBM28Q9NW13 759 aaKnown RBP7.49□□□□□ -1.21
HOXA9-206ENST00000497089 RSPH14Q9UHP6 348 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 MKL2Q9ULH7 1088 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 CEP83Q9Y592 693 aa7.49□□□□□ -1.21
HOXA9-206ENST00000497089 RANBP2P49792 3224 aaKnown RBP7.49□□□□□ -1.21
HOXA9-206ENST00000497089 SYCE3A1L190 88 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 SNAI1O95863 264 aaPredicted RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 CASQ1P31415 396 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 AFF1P51825 1210 aaKnown RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 HAND2P61296 217 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 TPM4P67936 248 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 RAD51AP2Q09MP3 1159 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 COL9A3Q14050 684 aaPredicted RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 BMS1Q14692 1282 aaKnown RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 SNX17Q15036 470 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 CCDC85BQ15834 202 aaPredicted RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 LRRC26Q2I0M4 334 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 SPRED3Q2MJR0 410 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 BMP2KLQ5H9B9 411 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 PRAMEF19Q5SWL8 479 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 KCTD1Q719H9 257 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 DGKHQ86XP1 1220 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 CPXCR1Q8N123 301 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 BEND7Q8N7W2 519 aaPredicted RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 FAM133AQ8N9E0 248 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 CCDC112Q8NEF3 446 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 BSNDQ8WZ55 320 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 ANKS1AQ92625 1134 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 ESR2Q92731 530 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 DDX11Q96FC9 970 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 SCARF2Q96GP6 870 aaPredicted RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 POP1Q99575 1024 aaKnown RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 TMEM47Q9BQJ4 181 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 CEP44Q9C0F1 390 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 TGIF2Q9GZN2 237 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 RANBP17Q9H2T7 1088 aaKnown RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 CTDP1Q9Y5B0 961 aaPredicted RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 V9GYY5 206 aaPredicted RBP7.48□□□□□ -1.21
HOXA9-206ENST00000497089 NEDD4P46934 1319 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 CNTNAP5Q8WYK1 1306 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 MCM3APO60318 1980 aa7.48□□□□□ -1.21
HOXA9-206ENST00000497089 METTL12A8MUP2 240 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 ZNF213O14771 459 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 GNB5O14775 395 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 MAFGO15525 162 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 DHX16O60231 1041 aaKnown RBP7.47□□□□□ -1.21
HOXA9-206ENST00000497089 ICAM1P05362 532 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 CCDC172P0C7W6 258 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 RARBP10826 455 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 PDHBP11177 359 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 AKR1A1P14550 325 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 GSPT1P15170 499 aaKnown RBP7.47□□□□□ -1.21
HOXA9-206ENST00000497089 ITPKAP23677 461 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 SATB1Q01826 763 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 ZNF543Q08ER8 600 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 LRRC41Q15345 812 aa7.47□□□□□ -1.21
HOXA9-206ENST00000497089 CCDC178Q5BJE1 867 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms