RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 RMND1Q9NWS8 449 aa20.24■□□□□ 0.83
RGP1-202ENST00000496906 A0A0U1RQG5 324 aaPredicted RBP20.23■□□□□ 0.83
RGP1-202ENST00000496906 SFI1A8K8P3 1242 aa20.23■□□□□ 0.83
RGP1-202ENST00000496906 ARL2P36404 184 aa20.23■□□□□ 0.83
RGP1-202ENST00000496906 ZNF200P98182 395 aaPredicted RBP20.23■□□□□ 0.83
RGP1-202ENST00000496906 KIAA0100Q14667 2235 aaKnown RBP20.23■□□□□ 0.83
RGP1-202ENST00000496906 FAM47CQ5HY64 1035 aa20.23■□□□□ 0.83
RGP1-202ENST00000496906 ANKLE1Q8NAG6 615 aa20.23■□□□□ 0.83
RGP1-202ENST00000496906 SLC43A3Q8NBI5 491 aa20.23■□□□□ 0.83
RGP1-202ENST00000496906 CCDC47Q96A33 483 aaKnown RBP20.23■□□□□ 0.83
RGP1-202ENST00000496906 ZHX3Q9H4I2 956 aa20.23■□□□□ 0.83
RGP1-202ENST00000496906 SUGCTQ9HAC7 445 aa20.23■□□□□ 0.83
RGP1-202ENST00000496906 BIN1O00499 593 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 TREHO43280 583 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 CAPN2P17655 700 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 GAP43P17677 238 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 CLCN3P51790 818 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 RTP1P59025 263 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 PTPN11Q06124 597 aaPredicted RBP20.22■□□□□ 0.83
RGP1-202ENST00000496906 HERC4Q5GLZ8 1057 aaPredicted RBP20.22■□□□□ 0.83
RGP1-202ENST00000496906 IER5Q5VY09 327 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 GDF6Q6KF10 455 aaPredicted RBP20.22■□□□□ 0.83
RGP1-202ENST00000496906 SFR1Q86XK3 245 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 METTL13Q8N6R0 699 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 TCP11Q8WWU5 503 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 C17orf75Q9HAS0 396 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 PCDHA2Q9Y5H9 948 aa20.22■□□□□ 0.83
RGP1-202ENST00000496906 KAT6AQ92794 2004 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 PLS3P13797 630 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 MORC3Q14149 939 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 MYCT1Q8N699 235 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 BSNDQ8WZ55 320 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 OLFML3Q9NRN5 406 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 LARSQ9P2J5 1176 aaKnown RBP20.21■□□□□ 0.83
RGP1-202ENST00000496906 SEL1LQ9UBV2 794 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 SMIM35A0A1B0GVV1 85 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 BMP6P22004 513 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 TMOD1P28289 359 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 DNM2P50570 870 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 FAM26FQ5R3K3 315 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 ODR4Q5SWX8 454 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 ISM2Q6H9L7 571 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 ASAP3Q8TDY4 903 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 PSPC1Q8WXF1 523 aaKnown RBP20.21■□□□□ 0.83
RGP1-202ENST00000496906 HPS3Q969F9 1004 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 FIZ1Q96SL8 496 aa20.21■□□□□ 0.83
RGP1-202ENST00000496906 SUCLA2Q9P2R7 463 aaPredicted RBP20.21■□□□□ 0.83
RGP1-202ENST00000496906 ARVCFO00192 962 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 CYP2C9P11712 490 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 COL6A1P12109 1028 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 GLRA2P23416 452 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 SASS6Q6UVJ0 657 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 RUFY4Q6ZNE9 571 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 KIAA0319LQ8IZA0 1049 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 DIS3LQ8TF46 1054 aaKnown RBP20.2■□□□□ 0.82
RGP1-202ENST00000496906 PRPF31Q8WWY3 499 aaKnown RBP20.2■□□□□ 0.82
RGP1-202ENST00000496906 CTAGE1Q96RT6 745 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 FUCA2Q9BTY2 467 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 SEZ6LQ9BYH1 1024 aa20.2■□□□□ 0.82
RGP1-202ENST00000496906 PEX3P56589 373 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 STK4Q13043 487 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 PSMD2Q13200 908 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 DMP1Q13316 513 aaPredicted RBP20.19■□□□□ 0.82
RGP1-202ENST00000496906 MXD4Q14582 209 aaPredicted RBP20.19■□□□□ 0.82
RGP1-202ENST00000496906 ZNF658Q5TYW1 1059 aaPredicted RBP20.19■□□□□ 0.82
RGP1-202ENST00000496906 TNS4Q8IZW8 715 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 KIAA0895Q8NCT3 520 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 ABHD8Q96I13 439 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 IFT74Q96LB3 600 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 MAP7D2Q96T17 732 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 FGFBP2Q9BYJ0 223 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 SENP6Q9GZR1 1112 aaPredicted RBP20.19■□□□□ 0.82
RGP1-202ENST00000496906 TBC1D7Q9P0N9 293 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 GDAQ9Y2T3 454 aa20.19■□□□□ 0.82
RGP1-202ENST00000496906 NAMPTP43490 491 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 NPTX2P47972 431 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 CDK7P50613 346 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 NLRP12P59046 1061 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 TYRO3Q06418 890 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 LAMTOR4Q0VGL1 99 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 PPP2R5AQ15172 486 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 PTGISQ16647 500 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 TAF2Q6P1X5 1199 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 SERINC5Q86VE9 423 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 FAM178BQ8IXR5 827 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 SPIRE2Q8WWL2 714 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 SLC39A2Q9NP94 309 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 TRMT13Q9NUP7 481 aaKnown RBP20.18■□□□□ 0.82
RGP1-202ENST00000496906 AKT3Q9Y243 479 aa20.18■□□□□ 0.82
RGP1-202ENST00000496906 MAPTP10636 758 aaKnown RBP20.17■□□□□ 0.82
RGP1-202ENST00000496906 NCKAP1LP55160 1127 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 CAPSQ13938 189 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 RHPN2Q8IUC4 686 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 SMYD4Q8IYR2 804 aaPredicted RBP20.17■□□□□ 0.82
RGP1-202ENST00000496906 GLIS3Q8NEA6 775 aa20.17■□□□□ 0.82
RGP1-202ENST00000496906 NTPCRQ9BSD7 190 aaKnown RBP20.17■□□□□ 0.82
RGP1-202ENST00000496906 GTPBP4Q9BZE4 634 aaKnown RBP20.17■□□□□ 0.82
RGP1-202ENST00000496906 FAM49AQ9H0Q0 323 aaPredicted RBP20.17■□□□□ 0.82
RGP1-202ENST00000496906 MRPL44Q9H9J2 332 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms