RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 ERVK-5Q9HDB9 667 aa21.43■■□□□ 1.02
CTDSP1-213ENST00000496785 DARSP14868 501 aaKnown RBP21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 LONP1P36776 959 aaKnown RBP21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 DRP2Q13474 957 aa21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 ARID2Q68CP9 1835 aa21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 TMEM40Q8WWA1 233 aa21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 CDK5RAP3Q96JB5 506 aa21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 ZNF396Q96N95 335 aaPredicted RBP21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 RAD9AQ99638 391 aa21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 DDX19AQ9NUU7 478 aaKnown RBP21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 KIAA1024Q9UPX6 916 aa21.42■■□□□ 1.02
CTDSP1-213ENST00000496785 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 DENND3A2RUS2 1198 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 USO1O60763 962 aaKnown RBP21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 SFPQP23246 707 aaKnown RBP eCLIP21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 PBX2P40425 430 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 RABGGTBP53611 331 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 TFDP1Q14186 410 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 IL17AQ16552 155 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 FAM228AQ86W67 206 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 TOP1MTQ969P6 601 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 TMEM143Q96AN5 459 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 NLRP4Q96MN2 994 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 TSPYL2Q9H2G4 693 aaPredicted RBP21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 C1orf112Q9NSG2 853 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 BMP2KQ9NSY1 1161 aaPredicted RBP21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 ST3GAL5Q9UNP4 418 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 DNM3Q9UQ16 869 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 INSL6Q9Y581 213 aa21.41■■□□□ 1.02
CTDSP1-213ENST00000496785 A0A087WZ62 844 aa21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 ENPP3O14638 875 aa21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 STAG3L1P0CL83 205 aa21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 ZSCAN22P10073 491 aaPredicted RBP21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 PPP2R2DQ66LE6 453 aa21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 SPRYD3Q8NCJ5 442 aa21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 PRPF31Q8WWY3 499 aaKnown RBP21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 FDXACB1Q9BRP7 624 aaPredicted RBP21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 NKX2-4Q9H2Z4 354 aa21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 XPNPEP1Q9NQW7 623 aa21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 MORC2Q9Y6X9 1032 aaPredicted RBP21.4■■□□□ 1.02
CTDSP1-213ENST00000496785 PP2D1A8MPX8 630 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 ZSCAN20P17040 1043 aaPredicted RBP21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 UBA7P41226 1012 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 PHKA2P46019 1235 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 POU5F1BQ06416 359 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 LAMTOR4Q0VGL1 99 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 HYIQ5T013 277 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 SRGAP1Q7Z6B7 1085 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 CALML4Q96GE6 196 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 ZNF576Q9H609 170 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 YBX2Q9Y2T7 364 aaKnown RBP21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 CLIC4Q9Y696 253 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 LOXHD1Q8IVV2 1947 aa21.39■■□□□ 1.01
CTDSP1-213ENST00000496785 EYA4O95677 639 aa21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 F13A1P00488 732 aa21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 PCBP1Q15365 356 aaKnown RBP eCLIP21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 PADI6Q6TGC4 694 aa21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 CABP7Q86V35 215 aa21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 NPAS4Q8IUM7 802 aa21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 ZNF668Q96K58 619 aaPredicted RBP21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 YME1L1Q96TA2 773 aa21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 BHMT2Q9H2M3 363 aa21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 SEMA6BQ9H3T3 888 aa21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 DACT1Q9NYF0 836 aa21.38■■□□□ 1.01
CTDSP1-213ENST00000496785 UPP2O95045 317 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 CA3P07451 260 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 CYP11B2P19099 503 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 CDC25AP30304 524 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 SARSP49591 514 aaKnown RBP21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 PTPAQ15257 358 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 ZRSR1Q15695 479 aaKnown RBP21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 ECM1Q16610 540 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 ATL3Q6DD88 541 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 FAM117BQ6P1L5 589 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 FAM173BQ6P4H8 233 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 SLC24A5Q71RS6 500 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 RNF149Q8NC42 400 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 RASSF8Q8NHQ8 419 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 USP28Q96RU2 1077 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 ADAM2Q99965 735 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 MMTAG2Q9BU76 263 aaKnown RBP21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 POLR3FQ9H1D9 316 aaPredicted RBP21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 TMX1Q9H3N1 280 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 CHST12Q9NRB3 414 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 RGS18Q9NS28 235 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 LRFN2Q9ULH4 789 aa21.37■■□□□ 1.01
CTDSP1-213ENST00000496785 SRGAP2CP0DJJ0 459 aa21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 ARL2P36404 184 aa21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 TXLNAP40222 546 aa21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 NASPP49321 788 aaPredicted RBP21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 HTRA4P83105 476 aaPredicted RBP21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 CEBPZQ03701 1054 aaKnown RBP21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 SLC39A14Q15043 492 aa21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 PPP2R5AQ15172 486 aa21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 STK38Q15208 465 aa21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 Q7L0L9 218 aa21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 CATSPER4Q7RTX7 472 aa21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 LINC01599Q8WXQ3 324 aa21.36■■□□□ 1.01
CTDSP1-213ENST00000496785 TTYH1Q9H313 450 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms