RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SELPP16109 830 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 MCM6Q14566 821 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 TSR1Q2NL82 804 aaKnown RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 RESP18Q5W5W9 173 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 ELMSAN1Q6PJG2 1045 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 C7orf61Q8IZ16 206 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 APBB2Q92870 758 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 FNBP1Q96RU3 617 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 MRPL4Q9BYD3 311 aaKnown RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 SERTAD1Q9UHV2 236 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 FBXO2Q9UK22 296 aaPredicted RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 GNEQ9Y223 722 aaKnown RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 STX10O60499 249 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 LDHAP00338 332 aaKnown RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 AXLP30530 894 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 TLE2Q04725 743 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 IKBKEQ14164 716 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 KRBA2Q6ZNG9 492 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 CATSPER3Q86XQ3 398 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 CCDC60Q8IWA6 550 aaPredicted RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 IGSF22Q8N9C0 903 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 RNF149Q8NC42 400 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 RNF169Q8NCN4 708 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 PCMTD1Q96MG8 357 aaPredicted RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 ATAD5Q96QE3 1844 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 GSTTP1A0A1W2PQM5 241 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 E9PMD0 336 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 AMHP03971 560 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 RGS19P49795 217 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 RAB27AP51159 221 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 CCDC40Q4G0X9 1142 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 PSRC1Q6PGN9 363 aaPredicted RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 TRIML1Q8N9V2 468 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 TOX2Q96NM4 488 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 PPP1R12CQ9BZL4 782 aa9.5□□□□□ -0.89
U2AF1-212ENST00000496462 PAK6Q9NQU5 681 aaPredicted RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 CGNQ9P2M7 1197 aaKnown RBP9.5□□□□□ -0.89
U2AF1-212ENST00000496462 HNRNPDLO14979 420 aaKnown RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 TRAK2O60296 914 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 PHACTR2O75167 634 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 PEX3P56589 373 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 NLRP11P59045 1033 aaKnown RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 MYOCDQ8IZQ8 938 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 KIAA1586Q9HCI6 787 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 AAASQ9NRG9 546 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 PCDHA2Q9Y5H9 948 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 MKI67P46013 3256 aaKnown RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 SPDYE4A6NLX3 237 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 MRPS6P82932 125 aaKnown RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 RAD51AP2Q09MP3 1159 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 SLC39A5Q6ZMH5 540 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 SYT2Q8N9I0 419 aaPredicted RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 PPP2R3CQ969Q6 453 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 CCDC51Q96ER9 411 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 GTF2IRD1Q9UHL9 959 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 MAFBQ9Y5Q3 323 aaPredicted RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 ZSWIM8A7E2V4 1837 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 M0R2N6 131 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 CETN3O15182 167 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 NAMPTP43490 491 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 TOB1P50616 345 aaPredicted RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 RNASELQ05823 741 aaKnown RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 SPAG1Q07617 926 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 PRPF4BQ13523 1007 aaKnown RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 TRIM50Q86XT4 487 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 RSPH1Q8WYR4 309 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 HAS1Q92839 578 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 GSDMAQ96QA5 445 aa9.49□□□□□ -0.89
U2AF1-212ENST00000496462 NIFKQ9BYG3 293 aaKnown RBP9.49□□□□□ -0.89
U2AF1-212ENST00000496462 ARIH2O95376 493 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 HARSP12081 509 aaKnown RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 CAVIN1Q6NZI2 390 aaKnown RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 NOTUMQ6P988 496 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 MTHFD1LQ6UB35 978 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 UNC13DQ70J99 1090 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 EPSTI1Q96J88 318 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 RNPEPQ9H4A4 650 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 UBN1Q9NPG3 1134 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 MAFO75444 373 aaPredicted RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 SLITRK3O94933 977 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 EPB41P11171 864 aaKnown RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 PLS3P13797 630 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 ATF7P17544 494 aaPredicted RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 CDC25AP30304 524 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 PSMC6P62333 389 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 STX1AQ16623 288 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 PLA2G4FQ68DD2 849 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 DNAJB3Q8WWF6 145 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 C1orf112Q9NSG2 853 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 PARP2Q9UGN5 583 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 SIPA1L1O43166 1804 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 IGSF9BQ9UPX0 1349 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 HIP1RO75146 1068 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 GUCY2CP25092 1073 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 CRYBB1P53674 252 aaPredicted RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 KLHL10Q6JEL2 608 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 KLHDC9Q8NEP7 349 aa9.48□□□□□ -0.89
U2AF1-212ENST00000496462 CACTINQ8WUQ7 758 aaKnown RBP9.48□□□□□ -0.89
U2AF1-212ENST00000496462 LENG1Q96BZ8 264 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms