RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 NRIP1P48552 1158 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 GPC3P51654 580 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 SMAD4Q13485 552 aaKnown RBP20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 SMAD2Q15796 467 aaKnown RBP20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 MTERF2Q49AM1 385 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 MOXD1Q6UVY6 613 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 KRT25Q7Z3Z0 450 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 ABI1Q8IZP0 508 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 EFHBQ8N7U6 833 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 NLRP7Q8WX94 980 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 TMEM117Q9H0C3 514 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 C11orf16Q9NQ32 467 aa20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 DDX25Q9UHL0 483 aaKnown RBP20.73■□□□□ 0.91
CLCNKA-207ENST00000495784 FGF18O76093 207 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 DARSP14868 501 aaKnown RBP20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 LAG3P18627 525 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 TARBP2Q15633 366 aaKnown RBP20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 NPY5RQ15761 445 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 INF2Q27J81 1249 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 XKR3Q5GH77 459 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 RBM23Q86U06 439 aaKnown RBP20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 COLGALT1Q8NBJ5 622 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 ETNPPLQ8TBG4 499 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 MBOAT7Q96N66 472 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 POP1Q99575 1024 aaKnown RBP20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 NIFKQ9BYG3 293 aaKnown RBP20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 SLKQ9H2G2 1235 aaPredicted RBP20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 TLE6Q9H808 572 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 TLR9Q9NR96 1032 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 HCSTQ9UBK5 93 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 KCNJ14Q9UNX9 436 aa20.72■□□□□ 0.91
CLCNKA-207ENST00000495784 CCDC194A0A1B0GVG4 234 aa20.71■□□□□ 0.91
CLCNKA-207ENST00000495784 XBP1P17861 261 aa20.71■□□□□ 0.91
CLCNKA-207ENST00000495784 DNM2P50570 870 aa20.71■□□□□ 0.91
CLCNKA-207ENST00000495784 SCRN1Q12765 414 aa20.71■□□□□ 0.91
CLCNKA-207ENST00000495784 LETM2Q2VYF4 491 aa20.71■□□□□ 0.91
CLCNKA-207ENST00000495784 RNF169Q8NCN4 708 aa20.71■□□□□ 0.91
CLCNKA-207ENST00000495784 PCDHGC5Q9Y5F6 944 aa20.71■□□□□ 0.91
CLCNKA-207ENST00000495784 TMEM150BA6NC51 233 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 C19orf67A6NJJ6 358 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 DCXO43602 365 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 CDC42EP1Q00587 391 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 DRP2Q13474 957 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 B3GNT9Q6UX72 402 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 ECHDC2Q86YB7 292 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 LRRC43Q8N309 656 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 FAM122AQ96E09 287 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 GCOM2Q9BZD3 368 aaPredicted RBP20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 CWH43Q9H720 699 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 DACT1Q9NYF0 836 aa20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 FNDC1Q4ZHG4 1894 aaPredicted RBP20.7■□□□□ 0.9
CLCNKA-207ENST00000495784 DDX11L8A8MPP1 907 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 SLC37A4O43826 429 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 FGFR4P22455 802 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 PLA2G5P39877 138 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 PDE12Q6L8Q7 609 aaKnown RBP20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 MSLNLQ96KJ4 702 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 CASD1Q96PB1 797 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 SH2D3AQ9BRG2 576 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 PHF20Q9BVI0 1012 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 CLEC1BQ9P126 229 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 PUF60Q9UHX1 559 aaKnown RBP20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 STK36Q9NRP7 1315 aa20.69■□□□□ 0.9
CLCNKA-207ENST00000495784 FSD2A1L4K1 749 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 PER2O15055 1255 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 STBD1O95210 358 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 EYA4O95677 639 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 PSMC5P62195 406 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 NEK8Q86SG6 692 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 ZNF558Q96NG5 402 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 RNF19AQ9NV58 838 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 TPCN1Q9ULQ1 816 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 BARX2Q9UMQ3 279 aaPredicted RBP20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 LZTS1Q9Y250 596 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 WDR81Q562E7 1941 aa20.68■□□□□ 0.9
CLCNKA-207ENST00000495784 PLXNA4Q9HCM2 1894 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 A0A0U1RQF3 1178 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 PRR33A8MZF0 331 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 MARCH6O60337 910 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 PFKFB2O60825 505 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 CSDE1O75534 798 aaKnown RBP20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 GLP2RO95838 553 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 GCFC2P16383 781 aaKnown RBP20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 SFPQP23246 707 aaKnown RBP eCLIP20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 PPM1AP35813 382 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 ERVFC1P60507 584 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 PLCB3Q01970 1234 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 COASYQ13057 564 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 KCNT2Q6UVM3 1135 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 LRRC55Q6ZSA7 311 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 SMRP1Q8NCR6 262 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 MRPS27Q92552 414 aaKnown RBP20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 FAM20AQ96MK3 541 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 CEP89Q96ST8 783 aa20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 CDCA3Q99618 268 aaPredicted RBP20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 JPH2Q9BR39 696 aaPredicted RBP20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 SUCLA2Q9P2R7 463 aaPredicted RBP20.67■□□□□ 0.9
CLCNKA-207ENST00000495784 A0A087WZ62 844 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 IGKV6-21A0A0C4DH24 114 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 EML1O00423 815 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms