RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
COL1A1-209ENST00000495677 ACSF2Q96CM8 615 aaPredicted RBP15.29■□□□□ 0.04
COL1A1-209ENST00000495677 WDR87Q6ZQQ6 2873 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 BACH1O14867 736 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 PI15O43692 258 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 EIF4BP23588 611 aaKnown RBP15.28■□□□□ 0.04
COL1A1-209ENST00000495677 PBX3P40426 434 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 TDGQ13569 410 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 ANGPT1Q15389 498 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 CLLU1OSQ5K130 101 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 RARS2Q5T160 578 aaKnown RBP15.28■□□□□ 0.04
COL1A1-209ENST00000495677 MIS18BP1Q6P0N0 1132 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 CASC1Q6TDU7 716 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 CMTR1Q8N1G2 835 aaKnown RBP15.28■□□□□ 0.04
COL1A1-209ENST00000495677 LINC01465Q8N7H1 131 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 MRPL9Q9BYD2 267 aaKnown RBP15.28■□□□□ 0.04
COL1A1-209ENST00000495677 ZBP1Q9H171 429 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 ADAMTS10Q9H324 1103 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 RIC8AQ9NPQ8 531 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 DUSP12Q9UNI6 340 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 CEP131Q9UPN4 1083 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 CACNA1IQ9P0X4 2223 aa15.28■□□□□ 0.04
COL1A1-209ENST00000495677 CCDC69A6NI79 296 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 VTNP04004 478 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 CTSAP10619 480 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 CHMLP26374 656 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 SREBF1P36956 1147 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 CLK2P49760 499 aaKnown RBP15.27■□□□□ 0.04
COL1A1-209ENST00000495677 BCAR1P56945 870 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 SWSAP1Q6NVH7 229 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 OTOP3Q7RTS5 596 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 GPR149Q86SP6 731 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 PPFIBP1Q86W92 1011 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 VPS52Q8N1B4 723 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 FANCBQ8NB91 859 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 DTWD2Q8NBA8 298 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 FLCNQ8NFG4 579 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 TMEM169Q96HH4 297 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 TRAIPQ9BWF2 469 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 ANO3Q9BYT9 981 aa15.27■□□□□ 0.04
COL1A1-209ENST00000495677 DNAH14Q0VDD8 3507 aa15.27■□□□□ 0.03
COL1A1-209ENST00000495677 SH2B2O14492 632 aaPredicted RBP15.26■□□□□ 0.03
COL1A1-209ENST00000495677 WEE2P0C1S8 567 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 TMOD1P28289 359 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 MCM5P33992 734 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 NLRP11P59045 1033 aaKnown RBP15.26■□□□□ 0.03
COL1A1-209ENST00000495677 AP3B2Q13367 1082 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 ZNF746Q6NUN9 644 aaPredicted RBP15.26■□□□□ 0.03
COL1A1-209ENST00000495677 PPP1R18Q6NYC8 613 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 TMTC3Q6ZXV5 915 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 DDX53Q86TM3 631 aaKnown RBP15.26■□□□□ 0.03
COL1A1-209ENST00000495677 METTL13Q8N6R0 699 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 C12orf76Q8N812 135 aaPredicted RBP15.26■□□□□ 0.03
COL1A1-209ENST00000495677 GLT8D2Q9H1C3 349 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 DACT1Q9NYF0 836 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 IGSF9Q9P2J2 1179 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 WNT16Q9UBV4 365 aa15.26■□□□□ 0.03
COL1A1-209ENST00000495677 OTOGLQ3ZCN5 2332 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 hCG_1642624A0A1W2PR95 340 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 hCG_1984214I3L0E3 225 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 SGSM2O43147 1006 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 PRC1O43663 620 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 LMNAP02545 664 aaKnown RBP15.25■□□□□ 0.03
COL1A1-209ENST00000495677 CYP3A4P08684 503 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 GSPT1P15170 499 aaKnown RBP15.25■□□□□ 0.03
COL1A1-209ENST00000495677 METAP2P50579 478 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL1A1-209ENST00000495677 TTC22Q5TAA0 569 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 EFCAB12Q6NXP0 572 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 NFXL1Q6ZNB6 911 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 C15orf39Q6ZRI6 1047 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 HEATR3Q7Z4Q2 680 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 SGMS1Q86VZ5 419 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 SMAP1Q8IYB5 467 aaPredicted RBP15.25■□□□□ 0.03
COL1A1-209ENST00000495677 ZNF713Q8N859 430 aaPredicted RBP15.25■□□□□ 0.03
COL1A1-209ENST00000495677 CRYGNQ8WXF5 182 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 KCNK12Q9HB15 430 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 CHST12Q9NRB3 414 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 TBC1D22BQ9NU19 505 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 STK39Q9UEW8 545 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 MIA3Q5JRA6 1907 aa15.25■□□□□ 0.03
COL1A1-209ENST00000495677 IGLV3-22A0A075B6J6 115 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 NT5C1B-RDH14C9J2C7 533 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 FAM86B1E9PN63 330 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 DDX39AO00148 427 aaKnown RBP15.24■□□□□ 0.03
COL1A1-209ENST00000495677 IPO5O00410 1097 aaKnown RBP15.24■□□□□ 0.03
COL1A1-209ENST00000495677 FAM86B2P0C5J1 330 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 DARSP14868 501 aaKnown RBP15.24■□□□□ 0.03
COL1A1-209ENST00000495677 EPCAMP16422 314 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 RXRAP19793 462 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 ZNF76P36508 570 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 WWC2Q6AWC2 1192 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 TYW1BQ6NUM6 668 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 KANK3Q6NY19 840 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 CCDC149Q6ZUS6 474 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 CABP7Q86V35 215 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 CKAP2LQ8IYA6 745 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 CCDC82Q8N4S0 544 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 TMEM87AQ8NBN3 555 aa15.24■□□□□ 0.03
COL1A1-209ENST00000495677 HELQQ8TDG4 1101 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms