RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 EVPLQ92817 2033 aa21.63■■□□□ 1.05
HDAC4-212ENST00000495497 ZBBXA8MT70 800 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 PLCG1P19174 1290 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 CD52P31358 61 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 CNKSR3Q6P9H4 555 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 EXOC8Q8IYI6 725 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 RASSF8Q8NHQ8 419 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 NLRP7Q8WX94 980 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 HERVK_113Q902F9 699 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 RNPC3Q96LT9 517 aaKnown RBP21.62■■□□□ 1.05
HDAC4-212ENST00000495497 PANK2Q9BZ23 570 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 CCSER1Q9C0I3 900 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 NT5C3AQ9H0P0 336 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 PCDHA7Q9UN72 937 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 NOC2LQ9Y3T9 749 aaKnown RBP21.62■■□□□ 1.05
HDAC4-212ENST00000495497 ATP6V1DQ9Y5K8 247 aa21.62■■□□□ 1.05
HDAC4-212ENST00000495497 A0A087WZ62 844 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 CUTAO60888 179 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 CSDE1O75534 798 aaKnown RBP21.61■■□□□ 1.05
HDAC4-212ENST00000495497 SSBP05455 408 aaKnown RBP eCLIP21.61■■□□□ 1.05
HDAC4-212ENST00000495497 ME1P48163 572 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 CRYBB1P53674 252 aaPredicted RBP21.61■■□□□ 1.05
HDAC4-212ENST00000495497 KRT85P78386 507 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 AXDND1Q5T1B0 1012 aaPredicted RBP21.61■■□□□ 1.05
HDAC4-212ENST00000495497 TSHZ1Q6ZSZ6 1077 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 KCNG4Q8TDN1 519 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 ASAP3Q8TDY4 903 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 SEPT8Q92599 483 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 NLRP4Q96MN2 994 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 SCLT1Q96NL6 688 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 FDXACB1Q9BRP7 624 aaPredicted RBP21.61■■□□□ 1.05
HDAC4-212ENST00000495497 IFIH1Q9BYX4 1025 aaKnown RBP21.61■■□□□ 1.05
HDAC4-212ENST00000495497 COL4A3BPQ9Y5P4 624 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 RANBP2P49792 3224 aaKnown RBP21.61■■□□□ 1.05
HDAC4-212ENST00000495497 TET1Q8NFU7 2136 aa21.61■■□□□ 1.05
HDAC4-212ENST00000495497 SIP14410 1827 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 PLA2G4BP0C869 781 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 SRGAP2CP0DJJ0 459 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 ACTN1P12814 892 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 LAMTOR4Q0VGL1 99 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 FAM102BQ5T8I3 360 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 LEO1Q8WVC0 666 aaPredicted RBP21.6■■□□□ 1.05
HDAC4-212ENST00000495497 TCP11Q8WWU5 503 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 PSPC1Q8WXF1 523 aaKnown RBP21.6■■□□□ 1.05
HDAC4-212ENST00000495497 POLR3FQ9H1D9 316 aaPredicted RBP21.6■■□□□ 1.05
HDAC4-212ENST00000495497 GDPD2Q9HCC8 539 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 BLOC1S4Q9NUP1 217 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 PADI3Q9ULW8 664 aa21.6■■□□□ 1.05
HDAC4-212ENST00000495497 ARID2Q68CP9 1835 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 A0A087X0B3 334 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 SLC26A4O43511 780 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 GAS2O43903 313 aaKnown RBP21.59■■□□□ 1.05
HDAC4-212ENST00000495497 RPS6KA5O75582 802 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 CYP11B2P19099 503 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 FGFR4P22455 802 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 ARL2P36404 184 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 DHX8Q14562 1220 aaKnown RBP21.59■■□□□ 1.05
HDAC4-212ENST00000495497 RASIP1Q5U651 963 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 RINT1Q6NUQ1 792 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 SHC4Q6S5L8 630 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 FAM228AQ86W67 206 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 SPATA32Q96LK8 384 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 RUSC1Q9BVN2 902 aa21.59■■□□□ 1.05
HDAC4-212ENST00000495497 GLRA2P23416 452 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 SLC12A3P55017 1021 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 RAD51AP2Q09MP3 1159 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 NFX1Q12986 1120 aaKnown RBP21.58■■□□□ 1.05
HDAC4-212ENST00000495497 PAK2Q13177 524 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 IKBKEQ14164 716 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 MCM6Q14566 821 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 TPRNQ4KMQ1 711 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 FAM109BQ6ICB4 259 aaPredicted RBP21.58■■□□□ 1.05
HDAC4-212ENST00000495497 SYT2Q8N9I0 419 aaPredicted RBP21.58■■□□□ 1.05
HDAC4-212ENST00000495497 MCPH1Q8NEM0 835 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 CCDC39Q9UFE4 941 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 CIZ1Q9ULV3 898 aaPredicted RBP21.58■■□□□ 1.05
HDAC4-212ENST00000495497 ST3GAL5Q9UNP4 418 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 SQORQ9Y6N5 450 aa21.58■■□□□ 1.05
HDAC4-212ENST00000495497 NPHP3-ACAD11A0A0J9YXS1 232 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 A0A1W2PPC1 479 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 DARSP14868 501 aaKnown RBP21.57■■□□□ 1.04
HDAC4-212ENST00000495497 EIF4BP23588 611 aaKnown RBP21.57■■□□□ 1.04
HDAC4-212ENST00000495497 TXLNAP40222 546 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 HABP4Q5JVS0 413 aaKnown RBP21.57■■□□□ 1.04
HDAC4-212ENST00000495497 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.57■■□□□ 1.04
HDAC4-212ENST00000495497 C1orf186Q6ZWK4 172 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 ZNF410Q86VK4 478 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 PDILTQ8N807 584 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 USP38Q8NB14 1042 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 RAD54LQ92698 747 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 GCOM2Q9BZD3 368 aaPredicted RBP21.57■■□□□ 1.04
HDAC4-212ENST00000495497 TMX1Q9H3N1 280 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 IFT122Q9HBG6 1241 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 ERVK-5Q9HDB9 667 aa21.57■■□□□ 1.04
HDAC4-212ENST00000495497 GRXCR1A8MXD5 290 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 ASAP2O43150 1006 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 BAIAP3O94812 1187 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 WDR5P61964 334 aaKnown RBP21.56■■□□□ 1.04
HDAC4-212ENST00000495497 DEFB103AP81534 67 aa21.56■■□□□ 1.04
HDAC4-212ENST00000495497 CDC42EP1Q00587 391 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms