RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 FAM187AA6NFU0 413 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 EVI5O60447 810 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 GFPT2O94808 682 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 STAT3P40763 770 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 PSMC6P62333 389 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 MAPK7Q13164 816 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 CNGA2Q16280 664 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 KIAA1755Q5JYT7 1200 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 PPP1R18Q6NYC8 613 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 RFFLQ8WZ73 363 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 GCNT4Q9P109 453 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 DAAM1Q9Y4D1 1078 aa16.65■□□□□ 0.26
SDF4-207ENST00000494748 POTEFA5A3E0 1075 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 TMEM253P0C7T8 217 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 POTEIP0CG38 1075 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 XRCC5P13010 732 aaKnown RBP16.64■□□□□ 0.25
SDF4-207ENST00000494748 FAM133BQ5BKY9 247 aaKnown RBP16.64■□□□□ 0.25
SDF4-207ENST00000494748 POTEGQ6S5H5 508 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 POTEEQ6S8J3 1075 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 SMIM5Q71RC9 77 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 TBC1D1Q86TI0 1168 aaPredicted RBP16.64■□□□□ 0.25
SDF4-207ENST00000494748 ANKS4BQ8N8V4 417 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 ZNF570Q96NI8 536 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 CNOT7Q9UIV1 285 aaKnown RBP16.64■□□□□ 0.25
SDF4-207ENST00000494748 SNX24Q9Y343 169 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 CFAP73A6NFT4 308 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 SNX3O60493 162 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 UBOX5O94941 541 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 BAG3O95817 575 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 RPL21P46778 160 aaKnown RBP16.64■□□□□ 0.25
SDF4-207ENST00000494748 PLTPP55058 493 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 ZNF211Q13398 564 aaPredicted RBP16.64■□□□□ 0.25
SDF4-207ENST00000494748 BMT2Q1RMZ1 405 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 TTC27Q6P3X3 843 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 GLYCTKQ8IVS8 523 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 WDR66Q8TBY9 1149 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 C18orf8Q96DM3 657 aa16.64■□□□□ 0.25
SDF4-207ENST00000494748 DIS3Q9Y2L1 958 aaKnown RBP16.64■□□□□ 0.25
SDF4-207ENST00000494748 IGKV6D-41A0A0C4DH26 115 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 AGTP01019 485 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 ALAS1P13196 640 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 MYO1EQ12965 1108 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 DHX34Q14147 1143 aaKnown RBP16.63■□□□□ 0.25
SDF4-207ENST00000494748 DCAF17Q5H9S7 520 aaPredicted RBP16.63■□□□□ 0.25
SDF4-207ENST00000494748 DENND2CQ68D51 928 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 SFR1Q86XK3 245 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 PALB2Q86YC2 1186 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 TAS2R14Q9NYV8 317 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
SDF4-207ENST00000494748 FRMPD4Q14CM0 1322 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 ZMYM2Q9UBW7 1377 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 GTPBP10A4D1E9 387 aaKnown RBP16.63■□□□□ 0.25
SDF4-207ENST00000494748 PDXKO00764 312 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 ANP32DO95626 131 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 RHBDL3P58872 404 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 AUHQ13825 339 aaKnown RBP16.63■□□□□ 0.25
SDF4-207ENST00000494748 CLEC10AQ8IUN9 316 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 TBC1D22AQ8WUA7 517 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 REEP2Q9BRK0 252 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 INTS9Q9NV88 658 aaKnown RBP16.63■□□□□ 0.25
SDF4-207ENST00000494748 CCDC169A6NNP5 214 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 CLTAP09496 248 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 NQO1P15559 274 aaKnown RBP16.63■□□□□ 0.25
SDF4-207ENST00000494748 BTDP43251 543 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 KCNA1Q09470 495 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 ADGRF4Q8IZF3 695 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 LRRC47Q8N1G4 583 aaKnown RBP16.63■□□□□ 0.25
SDF4-207ENST00000494748 MBOAT7Q96N66 472 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 IKZF4Q9H2S9 585 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 ZNF287Q9HBT7 754 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
SDF4-207ENST00000494748 PNMA6FA0A0J9YX94 578 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 FERP16591 822 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 POLD1P28340 1107 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 ALDH5A1P51649 535 aaPredicted RBP16.62■□□□□ 0.25
SDF4-207ENST00000494748 GSTO1P78417 241 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 PRELID2Q8N945 189 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 NRAPQ86VF7 1730 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 GPR75-ASB3A0A0A6YYF3 556 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 A0A1B0GUA9 196 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 NR3C1P04150 777 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 LINC00116Q8NCU8 138 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■■□ 23.1
SDF4-207ENST00000494748 MYO3BQ8WXR4 1341 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 ANKRD63C9JTQ0 380 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 CLGNO14967 610 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 TP73O15350 636 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 SLC16A3O15427 465 aaKnown RBP16.62■□□□□ 0.25
SDF4-207ENST00000494748 RGS16O15492 202 aaPredicted RBP16.62■□□□□ 0.25
SDF4-207ENST00000494748 SLC26A4O43511 780 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 SPATA31C1P0DKV0 1188 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 SOX5P35711 763 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 CATSPER3Q86XQ3 398 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 CCDC24Q8N4L8 307 aa16.62■□□□□ 0.25
SDF4-207ENST00000494748 THOC1Q96FV9 657 aaKnown RBP16.62■□□□□ 0.25
SDF4-207ENST00000494748 TLDC2A0PJX2 215 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 SMIM23A6NLE4 172 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 RSPH10B2B2RC85 870 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms