RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-216ENST00000494613 SUCLA2Q9P2R7 463 aaPredicted RBP17.5■□□□□ 0.39
LIMS2-216ENST00000494613 MRPL42Q9Y6G3 142 aaKnown RBP17.5■□□□□ 0.39
LIMS2-216ENST00000494613 WDR81Q562E7 1941 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 GRM6O15303 877 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 ZSCAN20P17040 1043 aaPredicted RBP17.49■□□□□ 0.39
LIMS2-216ENST00000494613 KCNQ1P51787 676 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 PLA2G4FQ68DD2 849 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 NCAPH2Q6IBW4 605 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 C4orf19Q8IY42 314 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 NLRP7Q8WX94 980 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 DYDC2Q96IM9 177 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 C8orf76Q96K31 380 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 PLVAPQ9BX97 442 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 PLAGL2Q9UPG8 496 aa17.49■□□□□ 0.39
LIMS2-216ENST00000494613 A0A087WZ62 844 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 ATP2B1P20020 1258 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 FGFR4P22455 802 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 TXKP42681 527 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 CTTNQ14247 550 aaKnown RBP17.48■□□□□ 0.39
LIMS2-216ENST00000494613 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
LIMS2-216ENST00000494613 CALCRLQ16602 461 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 OTUD6AQ7L8S5 288 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 KSR1Q8IVT5 923 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 TPH2Q8IWU9 490 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 CEP170P1Q96L14 293 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 SCLT1Q96NL6 688 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 MTMR9Q96QG7 549 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 HSD17B14Q9BPX1 270 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 FDXACB1Q9BRP7 624 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-216ENST00000494613 C11orf84Q9BUA3 381 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-216ENST00000494613 GCOM2Q9BZD3 368 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-216ENST00000494613 ELAC1Q9H777 363 aaKnown RBP17.48■□□□□ 0.39
LIMS2-216ENST00000494613 ZSWIM4Q9H7M6 989 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 TTC12Q9H892 705 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-216ENST00000494613 ATP6V0A4Q9HBG4 840 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 ALG13Q9NP73 1137 aaKnown RBP17.48■□□□□ 0.39
LIMS2-216ENST00000494613 SH2B1Q9NRF2 756 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-216ENST00000494613 VCANP13611 3396 aa17.48■□□□□ 0.39
LIMS2-216ENST00000494613 TBKBP1A7MCY6 615 aa17.47■□□□□ 0.39
LIMS2-216ENST00000494613 RHPN2Q8IUC4 686 aa17.47■□□□□ 0.39
LIMS2-216ENST00000494613 EXOC8Q8IYI6 725 aa17.47■□□□□ 0.39
LIMS2-216ENST00000494613 IL27Q8NEV9 243 aa17.47■□□□□ 0.39
LIMS2-216ENST00000494613 FBXO18Q8NFZ0 1043 aa17.47■□□□□ 0.39
LIMS2-216ENST00000494613 SPPL3Q8TCT6 385 aa17.47■□□□□ 0.39
LIMS2-216ENST00000494613 ADAMTS19Q8TE59 1207 aa17.47■□□□□ 0.39
LIMS2-216ENST00000494613 EIF2AK1Q9BQI3 630 aaKnown RBP17.47■□□□□ 0.39
LIMS2-216ENST00000494613 JPH2Q9BR39 696 aaPredicted RBP17.47■□□□□ 0.39
LIMS2-216ENST00000494613 LXNQ9BS40 222 aa17.47■□□□□ 0.39
LIMS2-216ENST00000494613 TMEM161AQ9NX61 479 aa17.47■□□□□ 0.39
LIMS2-216ENST00000494613 FGFR1P11362 822 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 YWHABP31946 246 aaKnown RBP17.46■□□□□ 0.39
LIMS2-216ENST00000494613 MCM7P33993 719 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 HMGN5P82970 282 aaKnown RBP17.46■□□□□ 0.39
LIMS2-216ENST00000494613 CYP4A11Q02928 519 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 NAALADL2Q58DX5 795 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 TCEAL5Q5H9L2 206 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 ECHDC2Q86YB7 292 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 KLHL23Q8NBE8 558 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 PRPF31Q8WWY3 499 aaKnown RBP17.46■□□□□ 0.39
LIMS2-216ENST00000494613 P2RX5Q93086 422 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 INO80BQ9C086 356 aaPredicted RBP17.46■□□□□ 0.39
LIMS2-216ENST00000494613 LMAN2LQ9H0V9 348 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 TMEM60Q9H2L4 133 aa17.46■□□□□ 0.39
LIMS2-216ENST00000494613 DHX33Q9H6R0 707 aaKnown RBP17.46■□□□□ 0.39
LIMS2-216ENST00000494613 TYW1Q9NV66 732 aaKnown RBP17.46■□□□□ 0.39
LIMS2-216ENST00000494613 NEMFO60524 1076 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 ITGB1P05556 798 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 CAMK1Q14012 370 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 ZNF174Q15697 407 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 XKR9Q5GH70 373 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 ZNF410Q86VK4 478 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 FAM184AQ8NB25 1140 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 SLC7A3Q8WY07 619 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 TMEM143Q96AN5 459 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 CASD1Q96PB1 797 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 FOXP1Q9H334 677 aaPredicted RBP17.45■□□□□ 0.38
LIMS2-216ENST00000494613 NSUN3Q9H649 340 aaKnown RBP17.45■□□□□ 0.38
LIMS2-216ENST00000494613 UBE2ZQ9H832 354 aaPredicted RBP17.45■□□□□ 0.38
LIMS2-216ENST00000494613 CHST12Q9NRB3 414 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 PPME1Q9Y570 386 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 XIRP2A4UGR9 3374 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 COL4A6Q14031 1691 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 CUL9Q8IWT3 2517 aa17.45■□□□□ 0.38
LIMS2-216ENST00000494613 A0A087WWV3 80 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 A0A0U1RQF3 1178 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 TNFRSF10AO00220 468 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 EOMESO95936 686 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 SRGAP2CP0DJJ0 459 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 DNAJB1P25685 340 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 RFC5P40937 340 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 POLGP54098 1239 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-216ENST00000494613 RABEP1Q15276 862 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 TIGD5Q53EQ6 642 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 SPOUT1Q5T280 376 aaKnown RBP17.44■□□□□ 0.38
LIMS2-216ENST00000494613 NECAB3Q96P71 396 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-216ENST00000494613 UHRF1Q96T88 793 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-216ENST00000494613 IFT122Q9HBG6 1241 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
LIMS2-216ENST00000494613 PCDHB12Q9Y5F1 795 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms