RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 POLR3CQ9BUI4 534 aaPredicted RBP18.04■□□□□ 0.48
SATB1-217ENST00000493952 PRDM12Q9H4Q4 367 aa18.04■□□□□ 0.48
SATB1-217ENST00000493952 TUFT1Q9NNX1 390 aa18.04■□□□□ 0.48
SATB1-217ENST00000493952 ANKEF1Q9NU02 776 aa18.04■□□□□ 0.48
SATB1-217ENST00000493952 SUCLA2Q9P2R7 463 aaPredicted RBP18.04■□□□□ 0.48
SATB1-217ENST00000493952 GPR182O15218 404 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 MGEA5O60502 916 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 SYT1P21579 422 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 EIF4BP23588 611 aaKnown RBP18.03■□□□□ 0.48
SATB1-217ENST00000493952 RPA1P27694 616 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 RARRES1P49788 294 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 ATP2C1P98194 919 aaPredicted RBP18.03■□□□□ 0.48
SATB1-217ENST00000493952 IL17AQ16552 155 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 ODR4Q5SWX8 454 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 BRAPQ7Z569 592 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 HSCBQ8IWL3 235 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 IGSF22Q8N9C0 903 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 NLRP7Q8WX94 980 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 TMEM143Q96AN5 459 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 SCLT1Q96NL6 688 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 TSPYL2Q9H2G4 693 aaPredicted RBP18.03■□□□□ 0.48
SATB1-217ENST00000493952 CERS4Q9HA82 394 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 LRWD1Q9UFC0 647 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 INSL6Q9Y581 213 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 CHD7Q9P2D1 2997 aa18.03■□□□□ 0.48
SATB1-217ENST00000493952 A0A087WZ62 844 aa18.02■□□□□ 0.48
SATB1-217ENST00000493952 DARSP14868 501 aaKnown RBP18.02■□□□□ 0.48
SATB1-217ENST00000493952 PRPHP41219 470 aa18.02■□□□□ 0.48
SATB1-217ENST00000493952 POTEGQ6S5H5 508 aa18.02■□□□□ 0.48
SATB1-217ENST00000493952 EXOC8Q8IYI6 725 aa18.02■□□□□ 0.48
SATB1-217ENST00000493952 SP7Q8TDD2 431 aaPredicted RBP18.02■□□□□ 0.48
SATB1-217ENST00000493952 MTRQ99707 1265 aa18.02■□□□□ 0.48
SATB1-217ENST00000493952 FDXACB1Q9BRP7 624 aaPredicted RBP18.02■□□□□ 0.48
SATB1-217ENST00000493952 XPNPEP1Q9NQW7 623 aa18.02■□□□□ 0.48
SATB1-217ENST00000493952 PLXNA4Q9HCM2 1894 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 LINC01553A4QN01 128 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 XRCC6P12956 609 aaKnown RBP eCLIP18.01■□□□□ 0.47
SATB1-217ENST00000493952 FOSL2P15408 326 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 FGFR4P22455 802 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 CDC42EP1Q00587 391 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 PDIA5Q14554 519 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 ECM1Q16610 540 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 HAUS3Q68CZ6 603 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 ZNF410Q86VK4 478 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 CRIPAKQ8N1N5 446 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 TCP11Q8WWU5 503 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 NLRP4Q96MN2 994 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 CCDC43Q96MW1 224 aaKnown RBP18.01■□□□□ 0.47
SATB1-217ENST00000493952 YME1L1Q96TA2 773 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 ADAM2Q99965 735 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 RAB34Q9BZG1 259 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 COL4A3BPQ9Y5P4 624 aa18.01■□□□□ 0.47
SATB1-217ENST00000493952 EPOPA6NHQ4 379 aa18■□□□□ 0.47
SATB1-217ENST00000493952 PP2D1A8MPX8 630 aa18■□□□□ 0.47
SATB1-217ENST00000493952 GAS2O43903 313 aaKnown RBP18■□□□□ 0.47
SATB1-217ENST00000493952 CSDE1O75534 798 aaKnown RBP18■□□□□ 0.47
SATB1-217ENST00000493952 DGAT1O75907 488 aa18■□□□□ 0.47
SATB1-217ENST00000493952 CCT6AP40227 531 aaKnown RBP18■□□□□ 0.47
SATB1-217ENST00000493952 RESTQ13127 1097 aa18■□□□□ 0.47
SATB1-217ENST00000493952 DSC3Q14574 896 aa18■□□□□ 0.47
SATB1-217ENST00000493952 DTHD1Q6ZMT9 781 aa18■□□□□ 0.47
SATB1-217ENST00000493952 SNX29Q8TEQ0 813 aa18■□□□□ 0.47
SATB1-217ENST00000493952 PRPF31Q8WWY3 499 aaKnown RBP18■□□□□ 0.47
SATB1-217ENST00000493952 PSPC1Q8WXF1 523 aaKnown RBP18■□□□□ 0.47
SATB1-217ENST00000493952 ARNTL2Q8WYA1 636 aa18■□□□□ 0.47
SATB1-217ENST00000493952 NACC1Q96RE7 527 aa18■□□□□ 0.47
SATB1-217ENST00000493952 GCOM2Q9BZD3 368 aaPredicted RBP18■□□□□ 0.47
SATB1-217ENST00000493952 RC3H2Q9HBD1 1191 aaKnown RBP18■□□□□ 0.47
SATB1-217ENST00000493952 ATP6V0A4Q9HBG4 840 aa18■□□□□ 0.47
SATB1-217ENST00000493952 IFT122Q9HBG6 1241 aa18■□□□□ 0.47
SATB1-217ENST00000493952 RGS18Q9NS28 235 aa18■□□□□ 0.47
SATB1-217ENST00000493952 DBR1Q9UK59 544 aaKnown RBP18■□□□□ 0.47
SATB1-217ENST00000493952 MTMR6Q9Y217 621 aa18■□□□□ 0.47
SATB1-217ENST00000493952 PRRC2BQ5JSZ5 2229 aaKnown RBP17.99■□□□□ 0.47
SATB1-217ENST00000493952 COL6A3P12111 3177 aa17.99■□□□□ 0.47
SATB1-217ENST00000493952 DENND3A2RUS2 1198 aa17.99■□□□□ 0.47
SATB1-217ENST00000493952 RFXAPO00287 272 aa17.99■□□□□ 0.47
SATB1-217ENST00000493952 MUTP22033 750 aa17.99■□□□□ 0.47
SATB1-217ENST00000493952 LAMTOR4Q0VGL1 99 aa17.99■□□□□ 0.47
SATB1-217ENST00000493952 ADGRE1Q14246 886 aa17.99■□□□□ 0.47
SATB1-217ENST00000493952 FAM43BQ6ZT52 329 aaPredicted RBP17.99■□□□□ 0.47
SATB1-217ENST00000493952 NPAS4Q8IUM7 802 aa17.99■□□□□ 0.47
SATB1-217ENST00000493952 GAS2L1Q99501 681 aaPredicted RBP17.99■□□□□ 0.47
SATB1-217ENST00000493952 MTUS1Q9ULD2 1270 aa17.99■□□□□ 0.47
SATB1-217ENST00000493952 TRANK1O15050 2925 aa17.99■□□□□ 0.47
SATB1-217ENST00000493952 VWA3AA6NCI4 1184 aa17.98■□□□□ 0.47
SATB1-217ENST00000493952 C9IYK1 514 aa17.98■□□□□ 0.47
SATB1-217ENST00000493952 USO1O60763 962 aaKnown RBP17.98■□□□□ 0.47
SATB1-217ENST00000493952 DGKIO75912 1065 aa17.98■□□□□ 0.47
SATB1-217ENST00000493952 IBSPP21815 317 aaPredicted RBP17.98■□□□□ 0.47
SATB1-217ENST00000493952 CDC25AP30304 524 aa17.98■□□□□ 0.47
SATB1-217ENST00000493952 SARSP49591 514 aaKnown RBP17.98■□□□□ 0.47
SATB1-217ENST00000493952 ERVK-21P61565 698 aa17.98■□□□□ 0.47
SATB1-217ENST00000493952 ARL6IP4Q66PJ3 421 aaKnown RBP17.98■□□□□ 0.47
SATB1-217ENST00000493952 ZNF689Q96CS4 500 aaPredicted RBP17.98■□□□□ 0.47
SATB1-217ENST00000493952 C1orf112Q9NSG2 853 aa17.98■□□□□ 0.47
SATB1-217ENST00000493952 TDRD15B5MCY1 1934 aaKnown RBP17.98■□□□□ 0.47
SATB1-217ENST00000493952 ADGRA3Q8IWK6 1321 aa17.98■□□□□ 0.47
SATB1-217ENST00000493952 STX6O43752 255 aa17.97■□□□□ 0.47
SATB1-217ENST00000493952 STAG3L1P0CL83 205 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms