RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ENO4A6NNW6 628 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 SGTAO43765 313 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 CCL5P13501 91 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 SCG2P13521 617 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 CNGA1P29973 690 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 TCF7P36402 384 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-222ENST00000493919 CACNB2Q08289 660 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-222ENST00000493919 SMUG1Q53HV7 270 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 NUGGCQ68CJ6 796 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 PPP1R14BQ96C90 147 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 FGD4Q96M96 766 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 GORASP1Q9BQQ3 440 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 RNF26Q9BY78 433 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-222ENST00000493919 UNC93B1Q9H1C4 597 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 SYNCQ9H7C4 482 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 ATP6V0A4Q9HBG4 840 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 ADD3Q9UEY8 706 aaKnown RBP12.67□□□□□ -0.38
BRCA1-222ENST00000493919 TUBGCP4Q9UGJ1 667 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 LIMCH1Q9UPQ0 1083 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 SSX2IPQ9Y2D8 614 aa12.67□□□□□ -0.38
BRCA1-222ENST00000493919 ASTN1O14525 1302 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 GCOM1H8Y6P7 765 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 RNF8O76064 485 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 POLR2MP0CAP2 368 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 LMAN1P49257 510 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 PAPOLAP51003 745 aaKnown RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 ALDH5A1P51649 535 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 SSRP1Q08945 709 aaKnown RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 BTG3Q14201 252 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 PFKFB3Q16875 520 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 ARMCX2Q7L311 632 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 KAT2BQ92831 832 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 RNF208Q9H0X6 261 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 CD248Q9HCU0 757 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 COL20A1Q9P218 1284 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 DDX25Q9UHL0 483 aaKnown RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 CUL3Q13618 768 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 SUZ12Q15022 739 aaKnown RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 PRAMEF19Q5SWL8 479 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 CCBE1Q6UXH8 406 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 FCHSD1Q86WN1 690 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 CCDC50Q8IVM0 306 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 CCDC83Q8IWF9 413 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 TMEM106CQ9BVX2 250 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 TSPY26PQ9H489 355 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 HMX1Q9NP08 348 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 BARHL2Q9NY43 387 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 PRELID1Q9Y255 219 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 CNPY2Q9Y2B0 182 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 ARIH1Q9Y4X5 557 aaPredicted RBP12.66□□□□□ -0.38
BRCA1-222ENST00000493919 PCDHGC5Q9Y5F6 944 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 LRRC37A2A6NM11 1700 aa12.66□□□□□ -0.38
BRCA1-222ENST00000493919 GOLGA6L4A6NEF3 574 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 STXBP3O00186 592 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 EVI5O60447 810 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 CD2BP2O95400 341 aaKnown RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 CD53P19397 219 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 EIF2AK2P19525 551 aaKnown RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 CCND3P30281 292 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 PIK3CAP42336 1068 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 HSD17B4P51659 736 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 SOX10P56693 466 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 MYBPC3Q14896 1274 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 UBE2SQ16763 222 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 CCDC144BQ3MJ40 725 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 TYW1BQ6NUM6 668 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 TLDC1Q6P9B6 456 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 USP17L6PQ6QN14 398 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 EEPD1Q7L9B9 569 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 ZNF467Q7Z7K2 595 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 HOOK3Q86VS8 718 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 KIAA1958Q8N8K9 716 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 SMARCC2Q8TAQ2 1214 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 CTNNBL1Q8WYA6 563 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 TAAR1Q96RJ0 339 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 RPS6KC1Q96S38 1066 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 RMDN3Q96TC7 470 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 C2orf49Q9BVC5 232 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 TNMDQ9H2S6 317 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 MRPL46Q9H2W6 279 aaKnown RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 PSTPIP2Q9H939 334 aa12.65□□□□□ -0.38
BRCA1-222ENST00000493919 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 PAIP2BQ9ULR5 123 aaKnown RBP12.65□□□□□ -0.38
BRCA1-222ENST00000493919 ELP1O95163 1332 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 RPTORQ8N122 1335 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 SYNGAP1Q96PV0 1343 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ATXN2Q99700 1313 aaKnown RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 ASB14A6NK59 587 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 LIN7AO14910 233 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 POLR3GO15318 223 aaPredicted RBP12.64□□□□□ -0.39
BRCA1-222ENST00000493919 TTI1O43156 1089 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 DEXIO95424 95 aa12.64□□□□□ -0.39
BRCA1-222ENST00000493919 CYBAP13498 195 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms