RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ICE2Q659A1 982 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 PARD3BQ8TEW8 1205 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 YY1AP1Q9H869 796 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 EFCAB6Q5THR3 1501 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 ASAP2O43150 1006 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 GRAPQ13588 217 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 ZC3H18Q86VM9 953 aaKnown RBP21.48■■□□□ 1.03
RNF40-203ENST00000493683 GRAPLQ8TC17 118 aaPredicted RBP21.48■■□□□ 1.03
RNF40-203ENST00000493683 HSPH1Q92598 858 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 LRRC37BQ96QE4 947 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 KRT7P08729 469 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 DHX34Q14147 1143 aaKnown RBP21.48■■□□□ 1.03
RNF40-203ENST00000493683 OLFM3Q96PB7 478 aa21.48■■□□□ 1.03
RNF40-203ENST00000493683 CLRN2A0PK11 232 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 SAAL1Q96ER3 474 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 PPP1R12AO14974 1030 aaPredicted RBP21.47■■□□□ 1.03
RNF40-203ENST00000493683 KIF9Q9HAQ2 790 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 IP6K2Q9UHH9 426 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 PLEKHA8P1O95397 391 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 ATP6V1G3Q96LB4 118 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 PEX3P56589 373 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 SENP1Q9P0U3 644 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 ZNF212Q9UDV6 495 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 MAGOHP61326 146 aaKnown RBP21.47■■□□□ 1.03
RNF40-203ENST00000493683 DYNLL2Q96FJ2 89 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 AIFM3Q96NN9 605 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 TEX12Q9BXU0 123 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 NGRNQ9NPE2 291 aaKnown RBP21.47■■□□□ 1.03
RNF40-203ENST00000493683 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.47■■□□□ 1.03
RNF40-203ENST00000493683 SNX5Q9Y5X3 404 aa21.47■■□□□ 1.03
RNF40-203ENST00000493683 NLRP1Q9C000 1473 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 ARHGAP10A1A4S6 786 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 CLEC4GQ6UXB4 293 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 CLEC17AQ6ZS10 378 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 EP400NLQ6ZTU2 488 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 CAPN11Q9UMQ6 739 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 ALX1Q15699 326 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 ANO5Q75V66 913 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 MTBPQ96DY7 904 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 TOPORSQ9NS56 1045 aaPredicted RBP21.46■■□□□ 1.03
RNF40-203ENST00000493683 TEKT2Q9UIF3 430 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 INTUQ9ULD6 942 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 ADGRG1Q9Y653 693 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 USP17L3A6NCW0 530 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 USP17L4A6NCW7 530 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 CREB3O43889 395 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 KRT76Q01546 638 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 TAP1Q03518 808 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 KCNH2Q12809 1159 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 MORF4L2Q15014 288 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 NAALADL2Q58DX5 795 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 C1orf146Q5VVC0 180 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 USP17L1Q7RTZ2 530 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 GUF1Q8N442 669 aaKnown RBP21.46■■□□□ 1.03
RNF40-203ENST00000493683 CCDC22O60826 627 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 ZNF18P17022 549 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 KNOP1Q1ED39 458 aaKnown RBP21.46■■□□□ 1.03
RNF40-203ENST00000493683 NLRP14Q86W24 1093 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 KLHL8Q9P2G9 620 aaPredicted RBP21.46■■□□□ 1.03
RNF40-203ENST00000493683 FBXO40Q9UH90 709 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 PCDHA6Q9UN73 950 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 G3BP2Q9UN86 482 aaKnown RBP21.46■■□□□ 1.03
RNF40-203ENST00000493683 PCDHA8Q9Y5H6 950 aa21.46■■□□□ 1.03
RNF40-203ENST00000493683 KCNJ6P48051 423 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 BEND6Q5SZJ8 279 aaPredicted RBP21.45■■□□□ 1.02
RNF40-203ENST00000493683 FAM83BQ5T0W9 1011 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 GOLGA8IPA6NC78 632 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 GOLGA8JA6NMD2 632 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 SFNP31947 248 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 KIAA1841Q6NSI8 718 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 SNF8Q96H20 258 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 CYTH2Q99418 400 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 LTKP29376 864 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 PI16Q6UXB8 463 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 DSTYKQ6XUX3 929 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 SCARA5Q6ZMJ2 495 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 SFR1Q86XK3 245 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 ZNF564Q8TBZ8 553 aaPredicted RBP21.45■■□□□ 1.02
RNF40-203ENST00000493683 AP3M2P53677 418 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 COASYQ13057 564 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 MAPRE2Q15555 327 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 ATP11CQ8NB49 1132 aa21.45■■□□□ 1.02
RNF40-203ENST00000493683 PRCPP42785 496 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 ARFIP2P53365 341 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 ELMSAN1Q6PJG2 1045 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 TTLL11Q8NHH1 800 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 SNX2O60749 519 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 ASNSP08243 561 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 SERPINB4P48594 390 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 LLGL1Q15334 1064 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 OR6B3Q8NGW1 331 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 SRGAP2CP0DJJ0 459 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 HDLBPQ00341 1268 aaKnown RBP21.44■■□□□ 1.02
RNF40-203ENST00000493683 GRAMD4Q6IC98 578 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 SYDE1Q6ZW31 735 aaPredicted RBP21.44■■□□□ 1.02
RNF40-203ENST00000493683 PODNQ7Z5L7 613 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 CDKL3Q8IVW4 592 aaPredicted RBP21.44■■□□□ 1.02
RNF40-203ENST00000493683 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.44■■□□□ 1.02
RNF40-203ENST00000493683 CATSPER1Q8NEC5 780 aa21.44■■□□□ 1.02
RNF40-203ENST00000493683 TTC8Q8TAM2 541 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms