RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 PFASO15067 1338 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 PSAPP07602 524 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 PRLRP16471 622 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 SLC9A1P19634 815 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 RFX1P22670 979 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 VGLL4Q14135 290 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 UGCGQ16739 394 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 DCPSQ96C86 337 aaKnown RBP11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 SIX2Q9NPC8 291 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 OGFRQ9NZT2 677 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 CSADQ9Y600 493 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 BACH1O14867 736 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 ATP8B1O43520 1251 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 N4BP1O75113 896 aaKnown RBP11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 ABCD1P33897 745 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 FMO5P49326 533 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 CLCN6P51797 869 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 JAM2P57087 298 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 MCCD1P59942 119 aaPredicted RBP11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 INTS8Q75QN2 995 aaKnown RBP11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 KIFAP3Q92845 792 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 FZD1Q9UP38 647 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 EXOC7Q9UPT5 735 aa11.8□□□□□ -0.52
PHACTR4-204ENST00000493669 PTPRFP10586 1907 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 MACROD2A1Z1Q3 448 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 BTNL10A8MVZ5 291 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 SPATA31C2B4DYI2 1134 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 P4HA2O15460 535 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 EXOC3O60645 756 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 GFPT2O94808 682 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 ATP1A1P05023 1023 aaKnown RBP11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 ICAM3P32942 547 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 GFPT1Q06210 699 aaPredicted RBP11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 BFSP1Q12934 665 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 XKR9Q5GH70 373 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 TMCO3Q6UWJ1 677 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 LBX2Q6XYB7 198 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 FAM133AQ8N9E0 248 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 MSANTD4Q8NCY6 345 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 VTI1AQ96AJ9 217 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 JPH1Q9HDC5 661 aaPredicted RBP11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 TFR2Q9UP52 801 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 FHOD1Q9Y613 1164 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 KRT13P13646 458 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 IREB2P48200 963 aaKnown RBP11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 CYP2J2P51589 502 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 RTP1P59025 263 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 HAUS6Q7Z4H7 955 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 IRF2BP2Q7Z5L9 587 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 PROCA1Q8NCQ7 364 aaPredicted RBP11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 SPIRE2Q8WWL2 714 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 NOX5Q96PH1 765 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 PUF60Q9UHX1 559 aaKnown RBP11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 TSKSQ9UJT2 592 aa11.79□□□□□ -0.52
PHACTR4-204ENST00000493669 RGS20O76081 388 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 ACTN1P12814 892 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 FERP16591 822 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 SMTNP53814 917 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 BRD3Q15059 726 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 RIOX2Q8IUF8 465 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 SLC9A2Q9UBY0 812 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 KCNG1Q9UIX4 513 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 DUSP10Q9Y6W6 482 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 OTOFQ9HC10 1997 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 PMM2O15305 246 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 EIF3JO75822 258 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 DDNO94850 711 aaPredicted RBP11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 SCP2P22307 547 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 PPATQ06203 517 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 BMS1Q14692 1282 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 STXBP2Q15833 593 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 IQCEQ6IPM2 695 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 VPS36Q86VN1 386 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 KSR1Q8IVT5 923 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 MCPH1Q8NEM0 835 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 CCDC151A5D8V7 595 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 CCDC172P0C7W6 258 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 STAT1P42224 750 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 APBA1Q02410 837 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 CETN1Q12798 172 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 DMP1Q13316 513 aaPredicted RBP11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 PLS1Q14651 629 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 MIS18BP1Q6P0N0 1132 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 ANO5Q75V66 913 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 XXYLT1Q8NBI6 393 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 NTPCRQ9BSD7 190 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 PARD6BQ9BYG5 372 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 GABBR1Q9UBS5 961 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 RAB21Q9UL25 225 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 SNX12Q9UMY4 172 aa11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 POLR2AP24928 1970 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-204ENST00000493669 LCTP09848 1927 aa11.77□□□□□ -0.52
PHACTR4-204ENST00000493669 H0YCG3 227 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 ENC1O14682 589 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 DGAT1O75907 488 aa11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 ZSCAN20P17040 1043 aaPredicted RBP11.77□□□□□ -0.53
PHACTR4-204ENST00000493669 TCP1P17987 556 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms